RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 TREML4Q6UXN2 200 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 STPG3Q8N7X2 389 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 DPRXA6NFQ7 191 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 IL6RP08887 468 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 NPY1RP25929 384 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 TMEM251Q8N6I4 163 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 BET1LQ9NYM9 111 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 LRRC29Q8WV35 223 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TTTY12Q9BZ98 90 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TRBV6-6A0A0A6YYG2 114 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 M0R2Z0 102 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 MFAP2P55001 183 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 RNPS1Q15287 305 aaKnown RBP9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TRAT1Q6PIZ9 186 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 VPS25Q9BRG1 176 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 UBE2ZQ9H832 354 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 PRDM6Q9NQX0 595 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 LAMTOR2Q9Y2Q5 125 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 IGHV3OR15-7A0A075B7D8 119 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TPTE2P1Q5T6R2 138 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 WDR73Q6P4I2 378 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 UNQ5815/PRO19632Q6UWF5 114 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 SLC24A4Q8NFF2 622 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 GGTLC1Q9BX51 225 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
PPFIA2-227ENST00000552948 MLNRO43193 412 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 APCSP02743 223 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 IGFBP2P18065 325 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 SMIM21Q3B7S5 101 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 FBXW9Q5XUX1 488 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 WDR86Q86TI4 376 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 LYG1Q8N1E2 194 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 PPP1R35Q8TAP8 253 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 TMEM45BQ96B21 275 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 LINC00470Q9BZP3 86 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 METRNQ9UJH8 293 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 MPDU1O75352 247 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 LHX2P50458 406 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 FOXF2Q12947 444 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 PSG7Q13046 419 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 IBA57Q5T440 356 aaKnown RBP9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 OR2Z1Q8NG97 314 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 OR5B3Q8NH48 314 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 MGST2Q99735 147 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 PARD6GQ9BYG4 376 aaPredicted RBP9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 STAG3L2P0CL84 134 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 GFRA1P56159 465 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 IL19Q9UHD0 177 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 SLC45A2Q9UMX9 530 aa9.65□□□□□ -0.86
PPFIA2-227ENST00000552948 TMPRSS2O15393 492 aa9.65□□□□□ -0.87
PPFIA2-227ENST00000552948 IGHV3-48P01763 117 aa9.65□□□□□ -0.87
PPFIA2-227ENST00000552948 OPRK1P41145 380 aa9.65□□□□□ -0.87
PPFIA2-227ENST00000552948 MEOX1P50221 254 aa9.65□□□□□ -0.87
PPFIA2-227ENST00000552948 EFNB3Q15768 340 aa9.65□□□□□ -0.87
PPFIA2-227ENST00000552948 SSPNQ14714 243 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 KRTAP27-1Q3LI81 207 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 MAFAQ8NHW3 353 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 C10orf142B7Z368 130 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 GPX1P07203 203 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 BTF3P20290 206 aaKnown RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 MPV17P39210 176 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 CLDN18P56856 261 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 TMEM144Q7Z5S9 345 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 GMPPAQ96IJ6 420 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 TXNDC17Q9BRA2 123 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 WNT2P09544 360 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 MYOD1P15172 320 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 GPR6P46095 362 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 STPG4Q8N801 248 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 KLF14Q8TD94 323 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 ZNF703Q9H7S9 590 aaPredicted RBP9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 ZFP30Q9Y2G7 519 aa9.64□□□□□ -0.87
PPFIA2-227ENST00000552948 HEATR1Q9H583 2144 aaKnown RBP9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 LY6G6EA0A0G2JKS1 128 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 YPEL3P61236 119 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 NRN1LQ496H8 165 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 LEMD1Q68G75 181 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 CENPVQ7Z7K6 275 aaPredicted RBP9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 OR2D3Q8NGH3 330 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 TRIB1Q96RU8 372 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 U3KQA8 63 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 VPS13AQ96RL7 3174 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 POLEQ07864 2286 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 NPIPB11E5RHQ5 1161 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 KLRC4-KLRK1H3BQV0 150 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 LINC00614P0C842 121 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 TAS2R45P59539 299 aa9.63□□□□□ -0.87
PPFIA2-227ENST00000552948 UBE2L3P68036 154 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms