RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 MSMBP08118 114 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PSMB6P28072 239 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 S100A7P31151 101 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 CA5AP35218 305 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 CSN1S1P47710 185 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 SULT1A1P50225 295 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 AQP4P55087 323 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 TPI1P60174 286 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PSME3P61289 254 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 MGAT3Q09327 533 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PLCXD2Q0VAA5 305 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PPP1R1AQ13522 171 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 CDK5R1Q15078 307 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 RSU1Q15404 277 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 GRK1Q15835 563 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 MIAQ16674 131 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 HIST3H3Q16695 136 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 DPPA3Q6W0C5 159 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 C7orf65Q6ZTY9 151 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 AAED1Q7RTV5 226 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 SLC36A1Q7Z2H8 476 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 COMMD7Q86VX2 200 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 KRT222Q8N1A0 295 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 SLC22A24Q8N4F4 322 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 TMEM156Q8N614 296 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ZNF676Q8N7Q3 588 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ZNF675Q8TD23 568 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 RAB2BQ8WUD1 216 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PPCDCQ96CD2 204 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 OPTNQ96CV9 577 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 DIRAS2Q96HU8 199 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 BTF3L4Q96K17 158 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ARL5BQ96KC2 179 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 OR52E6Q96RD3 313 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ULBP3Q9BZM4 244 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 DERL2Q9GZP9 239 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 MAP1LC3AQ9H492 121 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PLEKHJ1Q9NW61 149 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 TP53TG1Q9Y2A0 90 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 RP1P56715 2156 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ARFGEF3Q5TH69 2177 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 THSD7AQ9UPZ6 1657 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 DOCK5Q9H7D0 1870 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 SIPA1L1O43166 1804 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 RAD50Q92878 1312 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 BRWD1Q9NSI6 2320 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 HEATR5BQ9P2D3 2071 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 A0A087WUU8 490 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 TMEM269A0A1B0GVZ9 245 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 H0Y980 276 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 RPP14O95059 124 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 AHSA1O95433 338 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 IFNA10P01566 189 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 C8orf88P0DMB2 117 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 DEFA4P12838 97 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 S100A4P26447 101 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 RPL12P30050 165 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 EIF2B2P49770 351 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 OR4D2P58180 307 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 UBE2G2P60604 165 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 CXCR4P61073 352 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 RPL30P62888 115 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 STX5Q13190 355 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 ELOBQ15370 118 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 SURF2Q15527 256 aaPredicted RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 AKIRIN2Q53H80 203 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 TNFAIP8L3Q5GJ75 292 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 SPOPLQ6IQ16 392 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 FAM19A5Q7Z5A7 132 aaPredicted RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 GID4Q8IVV7 300 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 IQCF2Q8IXL9 164 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 TMEM161BQ8NDZ6 487 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 WFDC11Q8NEX6 87 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 OR2T27Q8NH04 317 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 HAVCR2Q8TDQ0 301 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 SLC37A2Q8TED4 501 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 MBD3L1Q8WWY6 194 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 RAB8BQ92930 207 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 IMP4Q96G21 291 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 ERMAPQ96PL5 475 aaPredicted RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 IMMP2LQ96T52 175 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 SERPINI1Q99574 410 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 CCL13Q99616 98 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 MRPL57Q9BQC6 102 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 ADAT1Q9BUB4 502 aaKnown RBP0.7□□□□□ -2.3
USP44-207ENST00000552237 CCDC90BQ9GZT6 254 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 MS4A6AQ9H2W1 248 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 PRTFDC1Q9NRG1 225 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 OR5AC2Q9NZP5 309 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 PRELID1Q9Y255 219 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 SNURFQ9Y675 71 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 MICAL3Q7RTP6 2002 aa0.7□□□□□ -2.3
USP44-207ENST00000552237 ALPK2Q86TB3 2170 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 IGHV1-18A0A0C4DH31 117 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 TINCRA0A1B0GVN0 87 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 OR4C45A6NMZ5 311 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 ORC5O43913 435 aa0.69□□□□□ -2.3
USP44-207ENST00000552237 MRPS14O60783 128 aaKnown RBP0.69□□□□□ -2.3
USP44-207ENST00000552237 APOMO95445 188 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms