RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 C15orf54Q8N8G6 183 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 TMEM186Q96B77 213 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 BET1LQ9NYM9 111 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 VAX2Q9UIW0 290 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
RAB3IP-216ENST00000552199 SMCO3A2RU48 225 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 IGHV1-8P0DP01 117 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 NPY1RP25929 384 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 TMEM177Q53S58 311 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 TREML4Q6UXN2 200 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 P2RX4Q99571 388 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 PRORYQ9H606 182 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 RALYQ9UKM9 306 aaKnown RBP11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 TEX50A0A1B0GTY4 177 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 CYB5BO43169 146 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 SOX15O60248 233 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 CA2P00918 260 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 IGHV2-70P01814 119 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 SFTPCP11686 197 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 REG1BP48304 166 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 PRCDQ00LT1 54 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 LY6DQ14210 128 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 RBMS3Q6XE24 437 aaKnown RBP11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 OR9G1Q8NH87 305 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 FKBP11Q9NYL4 201 aa11.41□□□□□ -0.58
RAB3IP-216ENST00000552199 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 ZNF137PP52743 207 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 ZNF841Q6ZN19 808 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 RAB24Q969Q5 203 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 PLEKHA3Q9HB20 300 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
RAB3IP-216ENST00000552199 OPRK1P41145 380 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 FAM90A2PQ658T7 463 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 FLYWCH2Q96CP2 140 aaKnown RBP11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 TVP23CQ96ET8 276 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 MGST2Q99735 147 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 ATRXP46100 2492 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 CRYBA1P05813 215 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 ARSJQ5FYB0 599 aaPredicted RBP11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 AVPI1Q5T686 147 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 UNQ6494/PRO21346Q6UXR6 183 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 SLC35E3Q7Z769 313 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 PDPNQ86YL7 162 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 OR5B3Q8NH48 314 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 C1orf159Q96HA4 380 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 MLXQ9UH92 298 aa11.39□□□□□ -0.59
RAB3IP-216ENST00000552199 OPN1MWP04001 364 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 OPN1MW2P0DN77 364 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 OPN1MW3P0DN78 364 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 CDC34P49427 236 aaPredicted RBP11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 OR4C13Q8NGP0 309 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 HIST1H2BAQ96A08 127 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 GGTLC1Q9BX51 225 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 RAB1BQ9H0U4 201 aa11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 LSM4Q9Y4Z0 139 aaKnown RBP11.38□□□□□ -0.59
RAB3IP-216ENST00000552199 A0A1W2PPE2 198 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 YIF1AO95070 293 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 MT-ND4LP03901 98 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 FOLR2P14207 255 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 IL3RAP26951 378 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TAGLN2P37802 199 aaKnown RBP11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 PSMB3P49720 205 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 ATP5IP56385 69 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 SMUG1Q53HV7 270 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 ISOC2Q96AB3 205 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 CBLN4Q9NTU7 201 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 WASHC3Q9Y3C0 194 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TNCP24821 2201 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 A0A087WWC5 75 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 A0A1W2PPH5 198 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 USF1P22415 310 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 CD81P60033 236 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 GCSAMLQ5JQS6 135 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 C11orf71Q6IPW1 123 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
RAB3IP-216ENST00000552199 TNFRSF14Q92956 283 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms