RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
ERBB3-215ENST00000550828 OR51J1Q9H342 316 aa10.63□□□□□ -0.71
ERBB3-215ENST00000550828 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
ERBB3-215ENST00000550828 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
ERBB3-215ENST00000550828 LINC00527Q9UJ94 153 aa10.63□□□□□ -0.71
ERBB3-215ENST00000550828 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 SNRPGP15A8MWD9 76 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 TEX22C9J3V5 150 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 PRAF2O60831 178 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 OPN1MWP04001 364 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 CRYBA1P05813 215 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 OPN1MW2P0DN77 364 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 OPN1MW3P0DN78 364 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
ERBB3-215ENST00000550828 VDAC1P21796 283 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 FXYD3Q14802 87 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 TNXAQ16473 311 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 ASPHD1Q5U4P2 390 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 C10orf99Q6UWK7 81 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 SLC35E3Q7Z769 313 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 FOXRED2Q8IWF2 684 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 C12orf45Q8N5I9 185 aaPredicted RBP10.62□□□□□ -0.71
ERBB3-215ENST00000550828 COQ8AQ8NI60 647 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 GRPEL2Q8TAA5 225 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 AIFM2Q9BRQ8 373 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
ERBB3-215ENST00000550828 PARP11Q9NR21 331 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
ERBB3-215ENST00000550828 FOXA2Q9Y261 457 aaPredicted RBP10.62□□□□□ -0.71
ERBB3-215ENST00000550828 TENM1Q9UKZ4 2725 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 G3V318 75 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 ST8SIA3O43173 380 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 WIPF1O43516 503 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 PITX3O75364 302 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 DHFRP00374 187 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 CRIP2P52943 208 aaPredicted RBP10.61□□□□□ -0.71
ERBB3-215ENST00000550828 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 FAM219AQ8IW50 185 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 WIPF2Q8TF74 440 aaPredicted RBP10.61□□□□□ -0.71
ERBB3-215ENST00000550828 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
ERBB3-215ENST00000550828 RRNAD1Q96FB5 475 aaKnown RBP10.61□□□□□ -0.71
ERBB3-215ENST00000550828 PHB2Q99623 299 aa10.61□□□□□ -0.71
ERBB3-215ENST00000550828 HMX3A6NHT5 357 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 CREBL2O60519 120 aaPredicted RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 IGF1P05019 195 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 FGF2P09038 288 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 APELAP0DMC3 54 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 MAS1LP35410 378 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 VDAC2P45880 294 aaPredicted RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 RPL27AP46776 148 aaKnown RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 CFHR3Q02985 330 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 SPINK9Q5DT21 86 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 MINDY2Q8NBR6 621 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 RNASE11Q8TAA1 199 aaKnown RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 WDR89Q96FK6 387 aaPredicted RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 OR10C1Q96KK4 312 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 WNT10AQ9GZT5 417 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 GPN1Q9HCN4 374 aaPredicted RBP10.6□□□□□ -0.71
ERBB3-215ENST00000550828 PRNDQ9UKY0 176 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 TMED3Q9Y3Q3 217 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 OR51B2Q9Y5P1 312 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 WSB1Q9Y6I7 421 aa10.6□□□□□ -0.71
ERBB3-215ENST00000550828 IGLC7A0M8Q6 106 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 MSGN1A6NI15 193 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 KCNAB3O43448 404 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SOX15O60248 233 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SNAPC5O75971 98 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 ATG12O94817 140 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 NXPH3O95157 252 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 CNIH1O95406 144 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SULT1A3P0DMM9 295 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SULT1A4P0DMN0 295 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 AREGP15514 252 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 PROK1P58294 105 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 KRTAP10-3P60369 221 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SMCO1Q147U7 214 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 HIST2H2BDQ6DRA6 164 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 STPG2Q8N412 459 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 OR4A16Q8NH70 328 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 SGMS2Q8NHU3 365 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
ERBB3-215ENST00000550828 A0A1B0GU03 582 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 AP4M1O00189 453 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 SIX6O95475 246 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 SLC25A6P12236 298 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
ERBB3-215ENST00000550828 ECSCRQ19T08 205 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
ERBB3-215ENST00000550828 ZNF429Q86V71 674 aa10.58□□□□□ -0.72
ERBB3-215ENST00000550828 LFNGQ8NES3 379 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms