RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
VDR-208ENST00000550325 FAM216AQ8WUB2 273 aa10.12□□□□□ -0.79
VDR-208ENST00000550325 OR8B2Q96RD0 313 aa10.12□□□□□ -0.79
VDR-208ENST00000550325 ZFHX2Q9C0A1 2572 aaPredicted RBP10.12□□□□□ -0.79
VDR-208ENST00000550325 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 GDF1P27539 372 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 CA7P43166 264 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 MFAP2P55001 183 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 RIPPLY2Q5TAB7 128 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 ZPBPQ9BS86 351 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 TECRQ9NZ01 308 aaKnown RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 WDR83OSQ9Y284 106 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 SVILO95425 2214 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 CACNA1GO43497 2377 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 CER1O95813 267 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 APOA2P02652 100 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 P04436 131 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 ESDP10768 282 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 RPL8P62917 257 aaKnown RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 WDR74Q6RFH5 385 aaPredicted RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 OR2D3Q8NGH3 330 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 SRSF7Q16629 238 aaKnown RBP eCLIP10.11□□□□□ -0.79
VDR-208ENST00000550325 IBA57Q5T440 356 aaKnown RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 RPS19BP1Q86WX3 136 aaKnown RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 NUDT11Q96G61 164 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 HSD17B10Q99714 261 aaKnown RBP10.11□□□□□ -0.79
VDR-208ENST00000550325 CLEC1BQ9P126 229 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 V9GYV3 84 aa10.11□□□□□ -0.79
VDR-208ENST00000550325 DNAJC13O75165 2243 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 IGHV1OR15-9A0A0B4J2B8 117 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 IGHV1-69-2A0A0G2JMI3 117 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 RFPL3SP0C7P2 107 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 STAG3L2P0CL84 134 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 STAG3L3P0CL85 134 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 EDDM3AQ14507 147 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 HES3Q5TGS1 186 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 ZNF645Q8N7E2 425 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MGST2Q99735 147 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 SFXN3Q9BWM7 321 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 AMY1AP04745 511 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 UBE2G1P62253 170 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MUC21Q5SSG8 566 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 TRAT1Q6PIZ9 186 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 C19orf35Q6ZS72 473 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 PMCHL2Q9BQD1 86 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 PRDM14Q9GZV8 571 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 CHRNA10Q9GZZ6 450 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MEGF9Q9H1U4 602 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 YLPM1P49750 1951 aaKnown RBP10.1□□□□□ -0.79
VDR-208ENST00000550325 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 IGHV2-26A0A0B4J1V2 119 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 TOMM40O96008 361 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MT-ND6P03923 174 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 RHOBP62745 196 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 GABRA6Q16445 453 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 WFDC8Q8IUA0 241 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 CORO2AQ92828 525 aa10.1□□□□□ -0.79
VDR-208ENST00000550325 MRPS17Q9Y2R5 130 aaKnown RBP10.1□□□□□ -0.79
VDR-208ENST00000550325 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
VDR-208ENST00000550325 MED12LQ86YW9 2145 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 HSBP1L1C9JCN9 74 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 M0R1X1 148 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 TOX4O94842 621 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 EPHA8P29322 1005 aaPredicted RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 FOXA3P55318 350 aaPredicted RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 SLAQ13239 276 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 OR10J3Q5JRS4 329 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 MIR17HGQ75NE6 70 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 SF3B5Q9BWJ5 86 aaKnown RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 GP6Q9HCN6 339 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 ZNF716A6NP11 495 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 GATA2P23769 480 aaPredicted RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 DCAF12Q5T6F0 453 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 NAA38Q9BRA0 125 aaKnown RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 GGTLC1Q9BX51 225 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 NBEAQ8NFP9 2946 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 FAM181BA6NEQ2 426 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 UQCRFS1P47985 274 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 CX3CL1P78423 397 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 STPG3Q8N7X2 389 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 PHF7Q9BWX1 381 aaPredicted RBP10.09□□□□□ -0.79
VDR-208ENST00000550325 ZNF355PQ9NSJ1 428 aa10.09□□□□□ -0.79
VDR-208ENST00000550325 TRBV9A0A0B4J1U6 114 aa10.08□□□□□ -0.8
VDR-208ENST00000550325 A0A1W2PN81 502 aa10.08□□□□□ -0.8
VDR-208ENST00000550325 OR4C46A6NHA9 309 aa10.08□□□□□ -0.8
VDR-208ENST00000550325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
VDR-208ENST00000550325 CD24P25063 80 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms