RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SSX3Q99909 188 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 TMEM231Q9H6L2 316 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 SRRM4A7MD48 611 aaKnown RBP8.11□□□□□ -1.11
RAB5B-206ENST00000549505 B4DEV8 164 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 GRNP28799 593 aaKnown RBP8.11□□□□□ -1.11
RAB5B-206ENST00000549505 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 SSX7Q7RTT5 188 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 CCL17Q92583 94 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 CLCC1Q96S66 551 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 FBXO7Q9Y3I1 522 aa8.11□□□□□ -1.11
RAB5B-206ENST00000549505 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 COLCA2A8K830 154 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 USF1P22415 310 aaPredicted RBP8.1□□□□□ -1.11
RAB5B-206ENST00000549505 LGALS7P47929 136 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 RAB11AP62491 216 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 ZCCHC24Q8N2G6 241 aaKnown RBP8.1□□□□□ -1.11
RAB5B-206ENST00000549505 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 TXNDC17Q9BRA2 123 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 MANBALQ9NQG1 85 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 SMCO4Q9NRQ5 59 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 VAX2Q9UIW0 290 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 M0R1W7 72 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 APOA2P02652 100 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 IL3RAP26951 378 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 RPL29P47914 159 aaKnown RBP8.1□□□□□ -1.11
RAB5B-206ENST00000549505 TEX45Q8NA69 505 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 OR11H6Q8NGC7 330 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 LEAP2Q969E1 77 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 SRSF8Q9BRL6 282 aaKnown RBP8.1□□□□□ -1.11
RAB5B-206ENST00000549505 MRPL20Q9BYC9 149 aaKnown RBP8.1□□□□□ -1.11
RAB5B-206ENST00000549505 RAB1BQ9H0U4 201 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 OR51B2Q9Y5P1 312 aa8.1□□□□□ -1.11
RAB5B-206ENST00000549505 SMCO3A2RU48 225 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 A6NNC1 897 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 TMEM250H0YL14 139 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 RRHO14718 337 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 CCL3L1P16619 93 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 COL8A2P25067 703 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 NFYBP25208 207 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRR20EP86478 221 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRR20CP86479 221 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRR20DP86480 221 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRR20BP86481 221 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRR20AP86496 221 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 LTC4SQ16873 150 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 FAM90A2PQ658T7 463 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 CACNG8Q8WXS5 425 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 RARRES2Q99969 163 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 WASHC3Q9Y3C0 194 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 FAM90A27PA6NNH2 459 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 FGF7P21781 194 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PNRC1Q12796 327 aaPredicted RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 ACOT6Q3I5F7 207 aaPredicted RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 SLC24A4Q8NFF2 622 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 ACTR3CQ9C0K3 210 aaPredicted RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 EIF5A2Q9GZV4 153 aaKnown RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 NPVFQ9HCQ7 196 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 HEATR1Q9H583 2144 aaKnown RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 IGKV1-16P04430 117 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PSMB3P49720 205 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 HLA-DRB5Q30154 266 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 ETV3LQ6ZN32 361 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 ITLN2Q8WWU7 325 aaPredicted RBP8.09□□□□□ -1.11
RAB5B-206ENST00000549505 C19orf24Q9BVV8 132 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 PRO1933Q9H354 126 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 SIRT7Q9NRC8 400 aa8.09□□□□□ -1.11
RAB5B-206ENST00000549505 CEP250Q9BV73 2442 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 A0A1W2PN81 502 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 IFNA1P01562 189 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 IFNA17P01571 189 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 SAA1P0DJI8 122 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-206ENST00000549505 NPY1RP25929 384 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 CHRNA7P36544 502 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 LHX4Q969G2 390 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 MGST2Q99735 147 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 ATG101Q9BSB4 218 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 GGTLC1Q9BX51 225 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 ANKRD11Q6UB99 2663 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-206ENST00000549505 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 MAP1LC3B2A6NCE7 125 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 CGB1A6NKQ9 187 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 ODF3BA8MYP8 253 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 AGPAT2O15120 278 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 YIF1AO95070 293 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 RNASE2P10153 161 aaKnown RBP8.08□□□□□ -1.12
RAB5B-206ENST00000549505 PRRX1P54821 245 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 WDR25Q64LD2 544 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-206ENST00000549505 OR8G2PQ6IF36 304 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 ABHD12Q8N2K0 398 aa8.08□□□□□ -1.12
RAB5B-206ENST00000549505 RNASEH2CQ8TDP1 164 aaKnown RBP8.08□□□□□ -1.12
RAB5B-206ENST00000549505 RXFP4Q8TDU9 374 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms