RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 CXCL3P19876 107 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 C11orf87Q6NUJ2 197 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 GRPEL2Q8TAA5 225 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 ZNF702PQ9H963 129 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 RAB18Q9NP72 206 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 A0A1B0GW64 132 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 C5orf51A6NDU8 294 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 C15orf61A6NNL5 157 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 M0QZK8 103 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 SNAPC5O75971 98 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 IFNA21P01568 189 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 HLA-GP17693 338 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 FXYD3Q14802 87 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 FCN2Q15485 313 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 Q6ZSV7 163 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 MMD2Q8IY49 270 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 ABHD5Q8WTS1 349 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 NOL4LQ96MY1 436 aaPredicted RBP13.55□□□□□ -0.24
KRT4-201ENST00000548097 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 NPFFR1Q9GZQ6 430 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 GSKIPQ9P0R6 139 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 MGAT4CQ9UBM8 478 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
KRT4-201ENST00000548097 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 DUXBA0A1W2PPF3 345 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 CGB1A6NKQ9 187 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 ACTL6BO94805 426 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 CRYBA1P05813 215 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 OR11H7Q8NGC8 314 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 OR4A5Q8NH83 315 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 FYTTD1Q96QD9 318 aaKnown RBP13.54□□□□□ -0.24
KRT4-201ENST00000548097 MED28Q9H204 178 aa13.54□□□□□ -0.24
KRT4-201ENST00000548097 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 SULT1A3P0DMM9 295 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 SULT1A4P0DMN0 295 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 H2BFSP57053 126 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 IAH1Q2TAA2 248 aaPredicted RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 ARSJQ5FYB0 599 aaPredicted RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 OR1S1Q8NH92 325 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 SRSF12Q8WXF0 261 aaKnown RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 TMEM14BQ9NUH8 114 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 MSGN1A6NI15 193 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 EGR2P11161 476 aaPredicted RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 CXorf66Q5JRM2 361 aaPredicted RBP13.53□□□□□ -0.24
KRT4-201ENST00000548097 SLC35E3Q7Z769 313 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 ARPC1AQ92747 370 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 PRSS22Q9GZN4 317 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 COMMD5Q9GZQ3 224 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
KRT4-201ENST00000548097 A0A1B0GU03 582 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 SCGB1D2O95969 90 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 IFNA17P01571 189 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 IGHG2P01859 326 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
KRT4-201ENST00000548097 THOC7Q6I9Y2 204 aaKnown RBP13.52□□□□□ -0.25
KRT4-201ENST00000548097 C19orf35Q6ZS72 473 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 CADM3Q8N126 398 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 OR5M8Q8NGP6 311 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.52□□□□□ -0.25
KRT4-201ENST00000548097 PRNDQ9UKY0 176 aa13.52□□□□□ -0.25
KRT4-201ENST00000548097 FOXA2Q9Y261 457 aaPredicted RBP13.52□□□□□ -0.25
KRT4-201ENST00000548097 G3V318 75 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 REG1AP05451 166 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 RPL27AP46776 148 aaKnown RBP13.51□□□□□ -0.25
KRT4-201ENST00000548097 ECSCRQ19T08 205 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 GSG1LQ6UXU4 331 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 LFNGQ8NES3 379 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 PDCD10Q9BUL8 212 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 MAGT1Q9H0U3 335 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 C2CD3Q4AC94 2353 aa13.51□□□□□ -0.25
KRT4-201ENST00000548097 PITX3O75364 302 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 FOXRED2Q8IWF2 684 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.5□□□□□ -0.25
KRT4-201ENST00000548097 ZBTB8BQ8NAP8 495 aaPredicted RBP13.5□□□□□ -0.25
KRT4-201ENST00000548097 TEX22C9J3V5 150 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 ASPHD1Q5U4P2 390 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 ZNF429Q86V71 674 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 OR4D5Q8NGN0 318 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 CHAC2Q8WUX2 184 aa13.5□□□□□ -0.25
KRT4-201ENST00000548097 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 HNRNPCP07910 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
KRT4-201ENST00000548097 AREGP15514 252 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 MAS1LP35410 378 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 HSPE1P61604 102 aaKnown RBP13.49□□□□□ -0.25
KRT4-201ENST00000548097 HIST2H2BDQ6DRA6 164 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 OR1L8Q8NGR8 309 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 SPIN2AQ99865 258 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 SPIN2BQ9BPZ2 258 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 NDUFA4L2Q9NRX3 87 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 SERTAD4Q9NUC0 356 aa13.49□□□□□ -0.25
KRT4-201ENST00000548097 COA4Q9NYJ1 87 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms