RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 FAM213BQ8TBF2 198 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 DTD1Q8TEA8 209 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 GNPNAT1Q96EK6 184 aaPredicted RBP6.61□□□□□ -1.35
CCDC65-203ENST00000547861 ADTRPQ96IZ2 230 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 TREM1Q9NP99 234 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
CCDC65-203ENST00000547861 UBE2L5PA0A1B0GUS4 154 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 CEBPZOSA8MTT3 80 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 UMAD1C9J7I0 102 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 AGPAT2O15120 278 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 RBMXL2O75526 392 aaKnown RBP6.6□□□□□ -1.35
CCDC65-203ENST00000547861 TSPAN15O95858 294 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 IFNA5P01569 189 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 IGHV2-70P01814 119 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 NQO2P16083 231 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 DLX6P56179 175 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 HFEQ30201 348 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 DEFB113Q30KQ7 82 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 KRTAP1-3Q8IUG1 177 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 VKORC1L1Q8N0U8 176 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 WFDC11Q8NEX6 87 aa6.6□□□□□ -1.35
CCDC65-203ENST00000547861 CIB3Q96Q77 187 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-203ENST00000547861 PARD6GQ9BYG4 376 aaPredicted RBP6.6□□□□□ -1.35
CCDC65-203ENST00000547861 PLXNB1O43157 2135 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 TRAV3A0A0B4J244 114 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 PMS2P5A8MQ11 134 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 ARG1P05089 322 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 SNRNP70P08621 437 aaKnown RBP6.59□□□□□ -1.35
CCDC65-203ENST00000547861 COL8A2P25067 703 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 SNCAP37840 140 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 TMEM155Q4W5P6 130 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 C10orf91Q5T1B1 145 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 OR8G2PQ6IF36 304 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 C11orf71Q6IPW1 123 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 SLC25A24Q6NUK1 477 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 ATRAIDQ6UW56 229 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 ZNF833PQ6ZTB9 187 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 Q71RC1 249 aaPredicted RBP6.59□□□□□ -1.35
CCDC65-203ENST00000547861 COMMD1Q8N668 190 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 OR4A16Q8NH70 328 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 RSG1Q9BU20 258 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
CCDC65-203ENST00000547861 UQCC1Q9NVA1 299 aa6.59□□□□□ -1.35
CCDC65-203ENST00000547861 CARHSP1Q9Y2V2 147 aaKnown RBP6.59□□□□□ -1.35
CCDC65-203ENST00000547861 C15orf61A6NNL5 157 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 C15orf62A8K5M9 175 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 FAM157AC9JC47 383 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 CD5P06127 495 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 OR8U8P0C7N1 319 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 CT45A6P0DMU7 189 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 CT45A5P0DMU8 189 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 CT45A7P0DMV0 189 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 SPCS3P61009 180 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 POU2AF1Q16633 256 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 LRRC75BQ2VPJ9 315 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 PDLIM3Q53GG5 364 aaPredicted RBP6.59□□□□□ -1.36
CCDC65-203ENST00000547861 AKR1C8PQ5T2L2 129 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 OR4A47Q6IF82 309 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 SCGB1C1Q8TD33 95 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 RBMXL1Q96E39 390 aaKnown RBP6.59□□□□□ -1.36
CCDC65-203ENST00000547861 SMR3AQ99954 134 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 PSMG3Q9BT73 122 aaPredicted RBP6.59□□□□□ -1.36
CCDC65-203ENST00000547861 TMEM147Q9BVK8 224 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 WDR61Q9GZS3 305 aaKnown RBP6.59□□□□□ -1.36
CCDC65-203ENST00000547861 SLC35D1Q9NTN3 355 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 CBLN4Q9NTU7 201 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 FBXO7Q9Y3I1 522 aa6.59□□□□□ -1.36
CCDC65-203ENST00000547861 FN1P02751 2386 aaKnown RBP6.58□□□□□ -1.36
CCDC65-203ENST00000547861 CSPG4Q6UVK1 2322 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 TRBV23-1A0A0A0MS06 115 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 A0A1B0GV50 99 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 C9JQL5 133 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 F8W036 122 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 RNASEK-C17orf49H0YIS7 233 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 FSTL3O95633 263 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 IFNA17P01571 189 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 SFTA3P0C7M3 94 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 DVL1P1P54792 670 aaPredicted RBP6.58□□□□□ -1.36
CCDC65-203ENST00000547861 RAB4BP61018 213 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
CCDC65-203ENST00000547861 DEFA5Q01523 94 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 GUCA2BQ16661 112 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 GUK1Q16774 197 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 RTL8BQ17RB0 113 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 ZNF674Q2M3X9 581 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 TM4SF20Q53R12 229 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 AVPI1Q5T686 147 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 DHRS7BQ6IAN0 325 aaPredicted RBP6.58□□□□□ -1.36
CCDC65-203ENST00000547861 SPSB3Q6PJ21 355 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 DPPA3Q6W0C5 159 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 LINC00311Q8N616 119 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 C8orf31Q8N9H6 132 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.58□□□□□ -1.36
CCDC65-203ENST00000547861 LFNGQ8NES3 379 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 OR52E5Q8NH55 327 aa6.58□□□□□ -1.36
CCDC65-203ENST00000547861 ZNF596Q8TC21 504 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms