RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 HSD17B13Q7Z5P4 300 aaPredicted RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 TOLLIPQ9H0E2 274 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 OR51B2Q9Y5P1 312 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 FAM157AC9JC47 383 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 H0YJW9 148 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 H2AFB1P0C5Y9 115 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 RUSC1-AS1Q66K80 236 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 C11orf71Q6IPW1 123 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 HCP5Q6MZN7 132 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 TGIF2LXQ8IUE1 241 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 PUSL1Q8N0Z8 303 aaKnown RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 CORO2AQ92828 525 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 GNG13Q9P2W3 67 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 NPBWR1P48145 328 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 EIF5AP63241 154 aaKnown RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 ACSM6Q6P461 480 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 OR8B3Q8NGG8 313 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 CD300LFQ8TDQ1 290 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 RXFP4Q8TDU9 374 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 FLYWCH2Q96CP2 140 aaKnown RBP9.69□□□□□ -0.86
CCDC38-202ENST00000546386 OR8B2Q96RD0 313 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 TMEM133Q9H2Q1 129 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 S4R3C0 116 aa9.69□□□□□ -0.86
CCDC38-202ENST00000546386 CA2P00918 260 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 F2RL1P55085 397 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 HBG1P69891 147 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 HBG2P69892 147 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 GUK1Q16774 197 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 TMEM14EPQ6UXP3 125 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 LHX4Q969G2 390 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 ARV1Q9H2C2 271 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
CCDC38-202ENST00000546386 PMS2P5A8MQ11 134 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 FCN1O00602 326 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 ARG1P05089 322 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 SNCAP37840 140 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 THBS3P49746 956 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 TAS2R30P59541 319 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 MEF2CQ06413 473 aaPredicted RBP9.68□□□□□ -0.86
CCDC38-202ENST00000546386 RTL8BQ17RB0 113 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 Q8N7P7 452 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC38-202ENST00000546386 WDR61Q9GZS3 305 aaKnown RBP9.68□□□□□ -0.86
CCDC38-202ENST00000546386 INSIG2Q9Y5U4 225 aa9.68□□□□□ -0.86
CCDC38-202ENST00000546386 SOX21Q9Y651 276 aaPredicted RBP9.68□□□□□ -0.86
CCDC38-202ENST00000546386 FLNAP21333 2647 aaKnown RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 HSPB1P04792 205 aaKnown RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 OR8U8P0C7N1 319 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 SLC25A6P12236 298 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 GPR6P46095 362 aaPredicted RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 RPP25LQ8N5L8 163 aaKnown RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 PERPQ96FX8 193 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 NABP2Q9BQ15 211 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 HIPK2Q9H2X6 1198 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 TEX50A0A1B0GTY4 177 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 A0A1B0GW64 132 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 SH2D7A6NKC9 451 aaPredicted RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 A6NNC1 897 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 C15orf61A6NNL5 157 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 ACTL6BO94805 426 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 PPOXP50336 477 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 HES1Q14469 280 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 FAM122CQ6P4D5 195 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 RAB1CQ92928 201 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 SSBP3Q9BWW4 388 aaPredicted RBP9.67□□□□□ -0.86
CCDC38-202ENST00000546386 PARP11Q9NR21 331 aa9.67□□□□□ -0.86
CCDC38-202ENST00000546386 ITPR3Q14573 2671 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 SSBP2P81877 361 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 LRRC75BQ2VPJ9 315 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 FFAR4Q5NUL3 377 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 MIC13Q5XKP0 118 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 ZNF833PQ6ZTB9 187 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 OR9G1Q8NH87 305 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 OR2T6Q8NHC8 308 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 GSX1Q9H4S2 264 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 ZNF430Q9H8G1 570 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 KAAG1Q9UBP8 84 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 LOC105371242A0A075B767 164 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 ATG12O94817 140 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 UBE2G2P60604 165 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 ISOC2Q96AB3 205 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 NEIL1Q96FI4 390 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 RCC1LQ96I51 464 aaKnown RBP9.66□□□□□ -0.86
CCDC38-202ENST00000546386 COA4Q9NYJ1 87 aa9.66□□□□□ -0.86
CCDC38-202ENST00000546386 APOA2P02652 100 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 CD1BP29016 333 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 VDAC2P45880 294 aaPredicted RBP9.65□□□□□ -0.86
CCDC38-202ENST00000546386 SPCS3P61009 180 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 ARSJQ5FYB0 599 aaPredicted RBP9.65□□□□□ -0.86
CCDC38-202ENST00000546386 OR10A7Q8NGE5 316 aa9.65□□□□□ -0.86
CCDC38-202ENST00000546386 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms