RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 DYNLRB2Q8TF09 96 aa17.21■□□□□ 0.35
CHD4-214ENST00000545942 CCDC140Q96MF4 163 aa17.21■□□□□ 0.35
CHD4-214ENST00000545942 CGB1A6NKQ9 187 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 LGALS9O00182 355 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 IGHV3-23P01764 117 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 GNRHRP30968 328 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 ARL3P36405 182 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 TAS2R20P59543 309 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 LSM3P62310 102 aaKnown RBP17.21■□□□□ 0.34
CHD4-214ENST00000545942 DHRS11Q6UWP2 260 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 CLEC19AQ6UXS0 136 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 LAX1Q8IWV1 398 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 TSPAN14Q8NG11 270 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 EEF1AKMT3Q96AZ1 226 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 SPATA25Q9BR10 227 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 PLEKHA2Q9HB19 425 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 ANAPC10Q9UM13 185 aa17.21■□□□□ 0.34
CHD4-214ENST00000545942 C2orf70A6NJV1 201 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 UPK2O00526 184 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 TNFAIP8O95379 198 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 REG1AP05451 166 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 FGF2P09038 288 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 LYL1P12980 280 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 FOLR2P14207 255 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 OR2B8PP59922 312 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 HAGHQ16775 308 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 GPHB5Q86YW7 130 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 DMBX1Q8NFW5 382 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 COMMD5Q9GZQ3 224 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 TMEM140Q9NV12 185 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 COMMD9Q9P000 198 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 S4R3C0 116 aa17.2■□□□□ 0.34
CHD4-214ENST00000545942 IGLV11-55A0A075B6I3 123 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 TRAV3A0A0B4J244 114 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 RFX2P48378 723 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 CD81P60033 236 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 DEFB114Q30KQ6 69 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 CXorf58Q96LI9 332 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 SRSF8Q9BRL6 282 aaKnown RBP17.19■□□□□ 0.34
CHD4-214ENST00000545942 ZNF2Q9BSG1 426 aaPredicted RBP17.19■□□□□ 0.34
CHD4-214ENST00000545942 SLC2A8Q9NY64 477 aa17.19■□□□□ 0.34
CHD4-214ENST00000545942 TECRQ9NZ01 308 aaKnown RBP17.19■□□□□ 0.34
CHD4-214ENST00000545942 TRBV7-1A0A0A6YYK4 115 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 IGLC7A0M8Q6 106 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 S1PR2O95136 353 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 NAT1P18440 290 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 TAS2R46P59540 309 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 FAM106AQ4KMX7 169 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 OR5H2Q8NGV7 314 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 MOB3AQ96BX8 217 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 NEURL2Q9BR09 285 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 PALMDQ9NP74 551 aa17.18■□□□□ 0.34
CHD4-214ENST00000545942 ZNF785A8K8V0 405 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 TPPPO94811 219 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 PMP2P02689 132 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 EDN2P20800 178 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 PRSS3P35030 304 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 SLC25A46Q96AG3 418 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 ISOC1Q96CN7 298 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 QTRT1Q9BXR0 403 aaKnown RBP17.17■□□□□ 0.34
CHD4-214ENST00000545942 PLEKHA3Q9HB20 300 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 ZC4H2Q9NQZ6 224 aa17.17■□□□□ 0.34
CHD4-214ENST00000545942 ZNF320A2RRD8 509 aa17.16■□□□□ 0.34
CHD4-214ENST00000545942 PGLYRP1O75594 196 aaPredicted RBP17.16■□□□□ 0.34
CHD4-214ENST00000545942 RLN1P04808 185 aa17.16■□□□□ 0.34
CHD4-214ENST00000545942 ERVK-16P61578 105 aa17.16■□□□□ 0.34
CHD4-214ENST00000545942 THOC7Q6I9Y2 204 aaKnown RBP17.16■□□□□ 0.34
CHD4-214ENST00000545942 EDA2RQ9HAV5 297 aa17.16■□□□□ 0.34
CHD4-214ENST00000545942 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 MARCH11A6NNE9 402 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 CLEC3BP05452 202 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 CD7P09564 240 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 RPA2P15927 270 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 CBLN1P23435 193 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 F2RP25116 425 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 GUCA2BQ16661 112 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 CMTM1Q8IZ96 169 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 OR6F1Q8NGZ6 308 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 THYN1Q9P016 225 aa17.15■□□□□ 0.34
CHD4-214ENST00000545942 A8MWP6 167 aa17.14■□□□□ 0.33
CHD4-214ENST00000545942 IFNA6P05013 189 aa17.14■□□□□ 0.33
CHD4-214ENST00000545942 EIF4EP06730 217 aaKnown RBP17.14■□□□□ 0.33
CHD4-214ENST00000545942 HSD17B13Q7Z5P4 300 aaPredicted RBP17.14■□□□□ 0.33
CHD4-214ENST00000545942 WDR89Q96FK6 387 aaPredicted RBP17.14■□□□□ 0.33
CHD4-214ENST00000545942 CEPT1Q9Y6K0 416 aa17.14■□□□□ 0.33
CHD4-214ENST00000545942 DNAH7Q8WXX0 4024 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 TMEM213A2RRL7 107 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 CYB5BO43169 146 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 TRAPPC2P0DI81 140 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 TRAPPC2BP0DI82 140 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 HRH1P35367 487 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 LINC00322Q6ZN03 302 aaPredicted RBP17.13■□□□□ 0.33
CHD4-214ENST00000545942 LYSMD2Q8IV50 215 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 OR10W1Q8NGF6 305 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 ZNF502Q8TBZ5 544 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 CACNG8Q8WXS5 425 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 DGCR14Q96DF8 476 aaKnown RBP17.13■□□□□ 0.33
CHD4-214ENST00000545942 FXYD6Q9H0Q3 95 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 COMMD3Q9UBI1 195 aa17.13■□□□□ 0.33
CHD4-214ENST00000545942 GPR31O00270 319 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms