RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 COA4Q9NYJ1 87 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 CACNG5Q9UF02 275 aa18.28■□□□□ 0.52
HOMER3-205ENST00000542541 NDUFA7O95182 113 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 COMPP49747 757 aaPredicted RBP18.27■□□□□ 0.52
HOMER3-205ENST00000542541 SRSF2Q01130 221 aaKnown RBP18.27■□□□□ 0.52
HOMER3-205ENST00000542541 SMCO1Q147U7 214 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 Q6ZSV7 163 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 ZNF429Q86V71 674 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 OR5B3Q8NH48 314 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 ARPC1AQ92747 370 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 FOXA2Q9Y261 457 aaPredicted RBP18.27■□□□□ 0.52
HOMER3-205ENST00000542541 ZNF257Q9Y2Q1 563 aa18.27■□□□□ 0.52
HOMER3-205ENST00000542541 OR2B8PP59922 312 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 Q6ZRM9 215 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 Q6ZS46 218 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 ABHD5Q8WTS1 349 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 PDCD10Q9BUL8 212 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 OR51B2Q9Y5P1 312 aa18.27■□□□□ 0.51
HOMER3-205ENST00000542541 AP4M1O00189 453 aa18.26■□□□□ 0.51
HOMER3-205ENST00000542541 RPL27AP46776 148 aaKnown RBP18.26■□□□□ 0.51
HOMER3-205ENST00000542541 PRIMA1Q86XR5 153 aa18.26■□□□□ 0.51
HOMER3-205ENST00000542541 OR1L8Q8NGR8 309 aa18.26■□□□□ 0.51
HOMER3-205ENST00000542541 SRSF12Q8WXF0 261 aaKnown RBP18.26■□□□□ 0.51
HOMER3-205ENST00000542541 C16orf95Q9H693 158 aa18.26■□□□□ 0.51
HOMER3-205ENST00000542541 PARP11Q9NR21 331 aa18.26■□□□□ 0.51
HOMER3-205ENST00000542541 HSPE1P61604 102 aaKnown RBP18.25■□□□□ 0.51
HOMER3-205ENST00000542541 OR4F5Q8NH21 305 aa18.25■□□□□ 0.51
HOMER3-205ENST00000542541 GRPEL2Q8TAA5 225 aa18.25■□□□□ 0.51
HOMER3-205ENST00000542541 C2CD3Q4AC94 2353 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 TEX50A0A1B0GTY4 177 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 C13orf42A0A1B0GVH6 325 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 IGF1P05019 195 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 VDAC2P45880 294 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-205ENST00000542541 SSBP2P81877 361 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-205ENST00000542541 TMEM267Q0VDI3 215 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-205ENST00000542541 AARDQ4LEZ3 155 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 OR1S1Q8NH92 325 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 QTRT1Q9BXR0 403 aaKnown RBP18.24■□□□□ 0.51
HOMER3-205ENST00000542541 MED28Q9H204 178 aa18.24■□□□□ 0.51
HOMER3-205ENST00000542541 C5orf51A6NDU8 294 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 MSGN1A6NI15 193 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 LINC01548A6NM66 108 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 FAM25EA8MYX2 175 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 IFNA17P01571 189 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 OPN1MWP04001 364 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 OPN1MW2P0DN77 364 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 OPN1MW3P0DN78 364 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 HKR1P10072 659 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 GSG1LQ6UXU4 331 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 SGMS2Q8NHU3 365 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 TMEM68Q96MH6 324 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 GON7Q9BXV9 100 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 ZNF580Q9UK33 172 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 ATP6V0E1O15342 81 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 ST8SIA3O43173 380 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 TRAPPC2P0DI81 140 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 TRAPPC2BP0DI82 140 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 NDPQ00604 133 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 IAH1Q2TAA2 248 aaPredicted RBP18.23■□□□□ 0.51
HOMER3-205ENST00000542541 OR52E5Q8NH55 327 aa18.23■□□□□ 0.51
HOMER3-205ENST00000542541 FYTTD1Q96QD9 318 aaKnown RBP18.23■□□□□ 0.51
HOMER3-205ENST00000542541 CCSO14618 274 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 C10orf55Q5SWW7 151 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 Q6ZNX1 250 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 SRSF8Q9BRL6 282 aaKnown RBP18.22■□□□□ 0.51
HOMER3-205ENST00000542541 HINT2Q9BX68 163 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 NDUFA4L2Q9NRX3 87 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 TNCP24821 2201 aa18.22■□□□□ 0.51
HOMER3-205ENST00000542541 MPTX1A8MV57 137 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 GOSR2O14653 212 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 PITX3O75364 302 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 MYOD1P15172 320 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 SPCS3P61009 180 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 AKIRIN2Q53H80 203 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 HSD17B13Q7Z5P4 300 aaPredicted RBP18.21■□□□□ 0.51
HOMER3-205ENST00000542541 MRPL41Q8IXM3 137 aaKnown RBP18.21■□□□□ 0.51
HOMER3-205ENST00000542541 TAF15Q92804 592 aaKnown RBP eCLIP18.21■□□□□ 0.51
HOMER3-205ENST00000542541 OR10C1Q96KK4 312 aa18.21■□□□□ 0.51
HOMER3-205ENST00000542541 FAM103A1Q9BTL3 118 aaKnown RBP18.21■□□□□ 0.51
HOMER3-205ENST00000542541 A0A1B0GUS0 222 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 FAM90A26D6RGX4 464 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 EGR2P11161 476 aaPredicted RBP18.2■□□□□ 0.5
HOMER3-205ENST00000542541 CRIP2P52943 208 aaPredicted RBP18.2■□□□□ 0.5
HOMER3-205ENST00000542541 STPG2Q8N412 459 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.2■□□□□ 0.5
HOMER3-205ENST00000542541 OR5M8Q8NGP6 311 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 LINC01006Q8NI28 216 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 C2orf50Q96LR7 162 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 SERTAD4Q9NUC0 356 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 GSKIPQ9P0R6 139 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 FBXO7Q9Y3I1 522 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 TRAV41A0A0B4J266 112 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 E7EUB6 86 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 PRCDQ00LT1 54 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 C2orf68Q2NKX9 166 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 UNQ5815/PRO19632Q6UWF5 114 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 LFNGQ8NES3 379 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 MGAT4CQ9UBM8 478 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 HSPB7Q9UBY9 170 aa18.2■□□□□ 0.5
HOMER3-205ENST00000542541 A0A1W2PN81 502 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms