RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
VARS2-211ENST00000541562 CHRNB4P30926 498 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 MRPS11P82912 194 aaKnown RBP12.4□□□□□ -0.42
VARS2-211ENST00000541562 OR10A7Q8NGE5 316 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 UHRF2Q96PU4 802 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 CTXND1A0A1B0GTU2 59 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 CGAP01215 116 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 MGST1P10620 155 aaKnown RBP12.4□□□□□ -0.42
VARS2-211ENST00000541562 TMEM256Q8N2U0 113 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 FAM103A1Q9BTL3 118 aaKnown RBP12.4□□□□□ -0.42
VARS2-211ENST00000541562 ENY2Q9NPA8 101 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 TCF19Q9Y242 345 aa12.4□□□□□ -0.42
VARS2-211ENST00000541562 CA2P00918 260 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 HIST3H2BBQ8N257 126 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 TRAV5A0A0B4J249 113 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 RNF224P0DH78 156 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 SGMS2Q8NHU3 365 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 ASCL3Q9NQ33 180 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■■□ 23.3
VARS2-211ENST00000541562 CEACAM1P13688 526 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 CBLN1P23435 193 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 SERF2P84101 59 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 PRR27Q6MZM9 219 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 MIR17HGQ75NE6 70 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 DOLPP1Q86YN1 238 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
VARS2-211ENST00000541562 KMT2EQ8IZD2 1858 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 C15orf65H3BRN8 121 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 NEIL1Q96FI4 390 aaPredicted RBP12.38□□□□□ -0.43
VARS2-211ENST00000541562 MGST2Q99735 147 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 SRRM4A7MD48 611 aaKnown RBP12.38□□□□□ -0.43
VARS2-211ENST00000541562 SCGB1D1O95968 90 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 HIST1H2BLQ99880 126 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
VARS2-211ENST00000541562 S4R3C0 116 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 NUPR1O60356 82 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 OR4A47Q6IF82 309 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 TMEM170AQ8WVE7 144 aa12.38□□□□□ -0.43
VARS2-211ENST00000541562 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 KBTBD11O94819 623 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 DEFA6Q01524 100 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 PSG5Q15238 335 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 HCP5Q6MZN7 132 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 OR9G1Q8NH87 305 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 YTHDF2Q9Y5A9 579 aaKnown RBP12.37□□□□□ -0.43
VARS2-211ENST00000541562 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 ZFHX3Q15911 3703 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 TRBV20OR9-2A0A075B6H5 130 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 A0A1B0GV90 55 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 CD24P25063 80 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
VARS2-211ENST00000541562 MBD3L1Q8WWY6 194 aa12.37□□□□□ -0.43
VARS2-211ENST00000541562 GSX1Q9H4S2 264 aaPredicted RBP12.37□□□□□ -0.43
VARS2-211ENST00000541562 SSBP2P81877 361 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 SSBP3Q9BWW4 388 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 IFI27L2Q9H2X8 130 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 SLC25A15Q9Y619 301 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 SEC14L6B5MCN3 397 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 OR2T10Q8NGZ9 312 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 TMEM210A6NLX4 147 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 E7EUB6 86 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 BATFQ16520 125 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 ARSJQ5FYB0 599 aaPredicted RBP12.36□□□□□ -0.43
VARS2-211ENST00000541562 CRYBG3Q68DQ2 2970 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 ATG101Q9BSB4 218 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
VARS2-211ENST00000541562 F2Z2F3 143 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 RAB29O14966 203 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 CRYBB3P26998 211 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 LYPD2Q6UXB3 125 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 STPG3Q8N7X2 389 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 OCC1Q8TAD7 63 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 RNASE7Q9H1E1 156 aaKnown RBP12.35□□□□□ -0.43
VARS2-211ENST00000541562 ZFYVE26Q68DK2 2539 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
VARS2-211ENST00000541562 C17orf112F2Z3M2 114 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 F6UZH7 168 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 J3QR06 171 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 RPL31P62899 125 aaKnown RBP12.35□□□□□ -0.43
VARS2-211ENST00000541562 TRAPPC1Q9Y5R8 145 aa12.35□□□□□ -0.43
VARS2-211ENST00000541562 TRGV10A0A0A0MS01 117 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 MGST3O14880 152 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 NPY1RP25929 384 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 SUMO1P63165 101 aaKnown RBP12.34□□□□□ -0.43
VARS2-211ENST00000541562 BLNKQ8WV28 456 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 HES4Q9HCC6 221 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 SRRM5B3KS81 715 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 GFRA3O60609 400 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms