RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ZNF66Q6ZN08 573 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 C19orf35Q6ZS72 473 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 GATAD1Q8WUU5 269 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 CCDC90BQ9GZT6 254 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 HRASLSQ9HDD0 168 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 SPATA2Q9UM82 520 aa9.09□□□□□ -0.95
SNHG1-216ENST00000541416 MFSD2BA6NFX1 497 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RAB27BO00194 218 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 REG1AP05451 166 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 NFYAP23511 347 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 PTBP1P26599 531 aaKnown RBP eCLIP9.08□□□□□ -0.963e-55■■□□□ 13.5
SNHG1-216ENST00000541416 RPS25P62851 125 aaKnown RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RPL30P62888 115 aaKnown RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 MLLT11Q13015 90 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RCN1Q15293 331 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RBMS2Q15434 407 aaKnown RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 C11orf45Q8TAV5 145 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 ZNF502Q8TBZ5 544 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 SRSF8Q9BRL6 282 aaKnown RBP9.08□□□□□ -0.96
SNHG1-216ENST00000541416 COMMD5Q9GZQ3 224 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 DCSTAMPQ9H295 470 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 BET1LQ9NYM9 111 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
SNHG1-216ENST00000541416 RYR1P21817 5038 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 IGHV3-35A0A0C4DH35 117 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 E7EUB6 86 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 TGOLN2O43493 480 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 MYL9P24844 172 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 THOC7Q6I9Y2 204 aaKnown RBP9.07□□□□□ -0.96
SNHG1-216ENST00000541416 CNIH2Q6PI25 160 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 SPSB3Q6PJ21 355 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 SSX9Q7RTT3 188 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 HSD17B13Q7Z5P4 300 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-216ENST00000541416 MFSD4AQ8N468 514 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 VN1R17PQ8TDU5 208 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 C2CD4CQ8TF44 421 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-216ENST00000541416 RARRES2Q99969 163 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 ZNF436Q9C0F3 470 aaPredicted RBP9.07□□□□□ -0.96
SNHG1-216ENST00000541416 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 ATG5Q9H1Y0 275 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 TAS2R8Q9NYW2 309 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
SNHG1-216ENST00000541416 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 IFITM5A6NNB3 132 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 NDUFA4O00483 81 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 SCGNO76038 276 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 FABP5Q01469 135 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 PLA2G7Q13093 441 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 IRF3Q14653 427 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 ATP6V0BQ99437 205 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
SNHG1-216ENST00000541416 FBXL17Q9UF56 701 aa9.06□□□□□ -0.96
SNHG1-216ENST00000541416 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 TRAV1-2A0A0B4J238 106 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 A0A1B0GW64 132 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 OR2T8A6NH00 312 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 K7EMT4 169 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNHG1-216ENST00000541416 RGS10O43665 173 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 FGF2P09038 288 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 ADMP35318 185 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 TAS2R31P59538 309 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 OR2B8PP59922 312 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 ARPC4P59998 168 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 CATR1Q13166 79 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 MSMO1Q15800 293 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 TIMM50Q3ZCQ8 353 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 CDNFQ49AH0 187 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 HACD4Q5VWC8 232 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 CENPSQ8N2Z9 138 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 OR5B3Q8NH48 314 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 CD300LFQ8TDQ1 290 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 CMTM3Q96MX0 182 aa9.05□□□□□ -0.96
SNHG1-216ENST00000541416 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
SNHG1-216ENST00000541416 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 C15orf62A8K5M9 175 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 EBAG9O00559 213 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 IGLV2-14P01704 120 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 RPA2P15927 270 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 NQO2P16083 231 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 RAB3BP20337 219 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 GNG2P59768 71 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 OGFRL1Q5TC84 451 aaPredicted RBP9.04□□□□□ -0.96
SNHG1-216ENST00000541416 LINC00336Q6ZUF6 198 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 SPAG16Q8N0X2 631 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 GDPD1Q8N9F7 314 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 ZBTB34Q8NCN2 500 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 DMBX1Q8NFW5 382 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 OR11H2Q8NH07 326 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 MGLLQ99685 303 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 ANXA10Q9UJ72 324 aa9.04□□□□□ -0.96
SNHG1-216ENST00000541416 IGLC7A0M8Q6 106 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms