RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SFXN4Q6P4A7 337 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 ZNF705AQ6ZN79 300 aaPredicted RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 SPATA12Q7Z6I5 190 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 LHFPL1Q86WI0 220 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 UMODL1-AS1Q8N2C9 162 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 ANKRD29Q8N6D5 301 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CLDN22Q8N7P3 220 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 GPR32P1Q8NGA4 272 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR8B12Q8NGG6 310 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR2T4Q8NH00 348 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR11H2Q8NH07 326 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OR5J2Q8NH18 312 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 KLK6Q92876 244 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 OPTNQ96CV9 577 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CPNE2Q96FN4 548 aaPredicted RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 C8orf76Q96K31 380 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CEP19Q96LK0 163 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CNBD2Q96M20 576 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 PPP1R2P1Q96PQ5 205 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CCL13Q99616 98 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 RETNLBQ9BQ08 111 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 C8orf4Q9NR00 106 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 CMTM6Q9NX76 183 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 PAQR5Q9NXK6 330 aaPredicted RBP0.76□□□□□ -2.29
MDM2-227ENST00000540709 ARL2BPQ9Y2Y0 163 aa0.76□□□□□ -2.29
MDM2-227ENST00000540709 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PLB1Q6P1J6 1458 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PLCH2O75038 1416 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 KIF15Q9NS87 1388 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ZNF532Q9HCE3 1301 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 TRBV20OR9-2A0A075B6H5 130 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 MEIKINA0A087WXM9 373 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 IGHV1-69-2A0A0G2JMI3 117 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 GGT3PA6NGU5 568 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 OR5K4A6NMS3 321 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 C9JCJ5 164 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SLC17A3O00476 420 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 CREBL2O60519 120 aaPredicted RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 CRYZL1O95825 349 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SERPINA1P01009 418 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 TCRBP04435 133 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 IFNA6P05013 189 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SERPINA7P05543 415 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 UCHL1P09936 223 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ZNF705BP0CI00 300 aaPredicted RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 CCL1P22362 96 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 RPL27AP46776 148 aaKnown RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 CSN1S1P47710 185 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 EIF2B2P49770 351 aaKnown RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 IDH3GP51553 393 aaPredicted RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 TAS2R20P59543 309 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PSME3P61289 254 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 AP1S1P61966 158 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 LSM6P62312 80 aaKnown RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 TBPL1P62380 186 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 CAV1Q03135 178 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 OR2F1Q13607 317 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 CDK10Q15131 360 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 KCNJ8Q15842 424 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PLPPR5Q32ZL2 321 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 AKIRIN2Q53H80 203 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ZNF550Q7Z398 422 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SLC35E3Q7Z769 313 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 S100A7AQ86SG5 101 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 GPHB5Q86YW7 130 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 C20orf196Q8IYI0 205 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SLC22A24Q8N4F4 322 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ZNF676Q8N7Q3 588 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 CNEP1R1Q8N9A8 125 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 OR1M1Q8NGA1 313 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 OR1L8Q8NGR8 309 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SLC35B4Q969S0 331 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 BTF3L4Q96K17 158 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 OR52E6Q96RD3 313 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SIGMAR1Q99720 223 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 CMSS1Q9BQ75 279 aaKnown RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 KIFC1Q9BW19 673 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 TTTY13Q9BZ97 58 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 TRIM4Q9C037 500 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 COMMD5Q9GZQ3 224 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 TMEM222Q9H0R3 208 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ENY2Q9NPA8 101 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 GLTPQ9NZD2 209 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 NAT8Q9UHE5 227 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 AK3Q9UIJ7 227 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 FBXO5Q9UKT4 447 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 SLC22A13Q9Y226 551 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PRELID1Q9Y255 219 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 COQ4Q9Y3A0 265 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 PRELID3BQ9Y3B1 194 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 FAM32AQ9Y421 112 aaKnown RBP0.75□□□□□ -2.29
MDM2-227ENST00000540709 TIMM9Q9Y5J7 89 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 FAM215AQ9Y5M1 114 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 ADAMTSL1Q8N6G6 1762 aa0.75□□□□□ -2.29
MDM2-227ENST00000540709 DISP1Q96F81 1524 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 GRIN2BQ13224 1484 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 MAP3K5Q99683 1374 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 A0A087WUU8 490 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 IGKV3D-7A0A0C4DH55 119 aa0.74□□□□□ -2.29
MDM2-227ENST00000540709 IGKV3OR2-268A0A0C4DH90 116 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms