RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CCL19Q99731 98 aa18.15■□□□□ 0.5
HOMER3-204ENST00000539827 SPOCK3Q9BQ16 436 aa18.15■□□□□ 0.5
HOMER3-204ENST00000539827 PARD6GQ9BYG4 376 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-204ENST00000539827 TREM1Q9NP99 234 aa18.15■□□□□ 0.5
HOMER3-204ENST00000539827 INSIG2Q9Y5U4 225 aa18.15■□□□□ 0.5
HOMER3-204ENST00000539827 IGHV1-3A0A0C4DH29 117 aa18.14■□□□□ 0.49
HOMER3-204ENST00000539827 IGFBPL1Q8WX77 278 aa18.14■□□□□ 0.49
HOMER3-204ENST00000539827 AMMECR1Q9Y4X0 333 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-204ENST00000539827 LCN2P80188 198 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.13■□□□□ 0.49
HOMER3-204ENST00000539827 RPEQ96AT9 228 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 VSIRQ9H7M9 311 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 ZNF257Q9Y2Q1 563 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 FGF7P21781 194 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 PRCDQ00LT1 54 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 LDLRAD2Q5SZI1 272 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 CLDND2Q8NHS1 167 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 PSMG3Q9BT73 122 aaPredicted RBP18.13■□□□□ 0.49
HOMER3-204ENST00000539827 PLEKHA3Q9HB20 300 aa18.13■□□□□ 0.49
HOMER3-204ENST00000539827 AKAP6Q13023 2319 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 FAM208BQ5VWN6 2430 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 A0A1W2PRD5 423 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 A0A1W2PRF3 423 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 A0A1W2PRM7 423 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 LY6LH3BQJ8 138 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 APOC3P02656 99 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 SRSF1Q07955 248 aaKnown RBP eCLIP18.12■□□□□ 0.49
HOMER3-204ENST00000539827 HCP5Q6MZN7 132 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 TMEM167AQ8TBQ9 72 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 FKBP11Q9NYL4 201 aa18.12■□□□□ 0.49
HOMER3-204ENST00000539827 PRTN3P24158 256 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 PDLIM4P50479 330 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 RAB11AP62491 216 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 RPL8P62917 257 aaKnown RBP18.11■□□□□ 0.49
HOMER3-204ENST00000539827 VWC2Q2TAL6 325 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 SLC25A17O43808 307 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 CA2P00918 260 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 IFNA4P05014 189 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 NPY1RP25929 384 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 SNCAP37840 140 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 SLC24A4Q8NFF2 622 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 OR11H6Q8NGC7 330 aa18.11■□□□□ 0.49
HOMER3-204ENST00000539827 TMEM218A2RU14 115 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 USF1P22415 310 aaPredicted RBP18.1■□□□□ 0.49
HOMER3-204ENST00000539827 CNTFRP26992 372 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 ELLP55199 621 aaPredicted RBP18.1■□□□□ 0.49
HOMER3-204ENST00000539827 LMO4P61968 165 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 VMA21Q3ZAQ7 101 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 VMO1Q7Z5L0 202 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 OR4A5Q8NH83 315 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 VSTM2AQ8TAG5 236 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 COMMD5Q9GZQ3 224 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 TPSG1Q9NRR2 321 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 DOPEY1Q5JWR5 2465 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 SMCO3A2RU48 225 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 PRSS46E5RG02 174 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 RNASEK-C17orf49H0YIS7 233 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 H2AFB1P0C5Y9 115 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 BTN1A1Q13410 526 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 TPTE2P1Q5T6R2 138 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 OR10W1Q8NGF6 305 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 OR5B3Q8NH48 314 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 ZNF430Q9H8G1 570 aaPredicted RBP18.1■□□□□ 0.49
HOMER3-204ENST00000539827 RPRMQ9NS64 109 aa18.1■□□□□ 0.49
HOMER3-204ENST00000539827 TNCP24821 2201 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 SPTAN1Q13813 2472 aaKnown RBP18.09■□□□□ 0.49
HOMER3-204ENST00000539827 SCAF4O95104 1147 aaKnown RBP18.09■□□□□ 0.49
HOMER3-204ENST00000539827 HTR1DP28221 377 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 LGALS7P47929 136 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 CCL20P78556 96 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 SPSB3Q6PJ21 355 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 TIMM9Q9Y5J7 89 aa18.09■□□□□ 0.49
HOMER3-204ENST00000539827 E7EUB6 86 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 CD1BP29016 333 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 C10orf55Q5SWW7 151 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 LHFPL4Q7Z7J7 247 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 OR1L8Q8NGR8 309 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 HILPDAQ9Y5L2 63 aa18.08■□□□□ 0.49
HOMER3-204ENST00000539827 A0A1W2PPI3 338 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 SERF2P84101 59 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 DPPA3Q6W0C5 159 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 COMMD1Q8N668 190 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 KIR3DL3Q8N743 410 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 NDUFA4L2Q9NRX3 87 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 DPM3Q9P2X0 92 aa18.08■□□□□ 0.48
HOMER3-204ENST00000539827 A1L4Q6 167 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 ODF3BA8MYP8 253 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 C9JQL5 133 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 MDKP21741 143 aaPredicted RBP18.07■□□□□ 0.48
HOMER3-204ENST00000539827 PAX6P26367 422 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 PAX2Q02962 417 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 GUK1Q16774 197 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 ACSM6Q6P461 480 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 C1orf122Q6ZSJ8 110 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 CENPVQ7Z7K6 275 aaPredicted RBP18.07■□□□□ 0.48
HOMER3-204ENST00000539827 SFT2D1Q8WV19 159 aa18.07■□□□□ 0.48
HOMER3-204ENST00000539827 USP9XQ93008 2570 aaPredicted RBP18.07■□□□□ 0.48
HOMER3-204ENST00000539827 IGHV2-70DA0A0C4DH43 119 aa18.06■□□□□ 0.48
HOMER3-204ENST00000539827 CD5P06127 495 aa18.06■□□□□ 0.48
HOMER3-204ENST00000539827 ADCYAP1P18509 176 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms