RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
DDB1-215ENST00000539712 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
DDB1-215ENST00000539712 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 IGLV11-55A0A075B6I3 123 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 APOA1P02647 267 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 REG1AP05451 166 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 NQO2P16083 231 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 EDN2P20800 178 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 HERV-K104P61576 105 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 CATR1Q13166 79 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 CTF1Q16619 201 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 TATDN3Q17R31 274 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 ZNF585BQ52M93 769 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 CMTM3Q96MX0 182 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 NAA50Q9GZZ1 169 aaKnown RBP12.71□□□□□ -0.37
DDB1-215ENST00000539712 FXYD6Q9H0Q3 95 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 HRASLSQ9HDD0 168 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 TMEM140Q9NV12 185 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 S4R3C0 116 aa12.71□□□□□ -0.37
DDB1-215ENST00000539712 H0Y980 276 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 OR2C1O95371 312 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 IGHV3-23P01764 117 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 FGF2P09038 288 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 ELK1P19419 428 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 HLA-DMAP28067 261 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 HRH1P35367 487 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 TAS2R46P59540 309 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 OR5H2Q8NGV7 314 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 SACSQ9NZJ4 4579 aa12.7□□□□□ -0.38
DDB1-215ENST00000539712 DPPA5A6NC42 116 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 HPGDSO60760 199 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 RLN1P04808 185 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 RPA2P15927 270 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 F2RP25116 425 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 OR10W1Q8NGF6 305 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 OR6F1Q8NGZ6 308 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 FCAMRQ8WWV6 532 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 TM2D3Q9BRN9 247 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
DDB1-215ENST00000539712 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 ZNF785A8K8V0 405 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 GGCTO75223 188 aaKnown RBP12.68□□□□□ -0.38
DDB1-215ENST00000539712 CD300EQ496F6 205 aaPredicted RBP12.68□□□□□ -0.38
DDB1-215ENST00000539712 FAM209BQ5JX69 171 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 CLEC19AQ6UXS0 136 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 CADM3Q8N126 398 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 Q8N402 240 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 DGCR14Q96DF8 476 aaKnown RBP12.68□□□□□ -0.38
DDB1-215ENST00000539712 SCPEP1Q9HB40 452 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 STARD9Q9P2P6 4700 aa12.68□□□□□ -0.38
DDB1-215ENST00000539712 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 C2orf70A6NJV1 201 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 LGALS9O00182 355 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 GABARAPO95166 117 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 FOLR2P14207 255 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 HIST1H1BP16401 226 aaKnown RBP12.67□□□□□ -0.38
DDB1-215ENST00000539712 LPAR6P43657 344 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 RORCP51449 518 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 SNX29P2Q8IUI4 249 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 SRSF8Q9BRL6 282 aaKnown RBP12.67□□□□□ -0.38
DDB1-215ENST00000539712 QTRT1Q9BXR0 403 aaKnown RBP12.67□□□□□ -0.38
DDB1-215ENST00000539712 COMMD5Q9GZQ3 224 aa12.67□□□□□ -0.38
DDB1-215ENST00000539712 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 GPR31O00270 319 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 DHFRP00374 187 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 CLEC3BP05452 202 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 MFAP2P55001 183 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 OR2K2Q8NGT1 345 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 NDUFA4L2Q9NRX3 87 aa12.66□□□□□ -0.38
DDB1-215ENST00000539712 TMEM213A2RRL7 107 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 DBX1A6NMT0 343 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 KRASP01116 189 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 DEFA4P12838 97 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 G6PCP35575 357 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 ARL3P36405 182 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 CMTM1Q8IZ96 169 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 ZNF502Q8TBZ5 544 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 CACNG8Q8WXS5 425 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 ZC4H2Q9NQZ6 224 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 NSG2Q9Y328 171 aa12.65□□□□□ -0.38
DDB1-215ENST00000539712 RYR2Q92736 4967 aa12.64□□□□□ -0.39
DDB1-215ENST00000539712 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
DDB1-215ENST00000539712 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms