RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PNKDQ8N490 385 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 TSKUQ8WUA8 353 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 PRSS46E5RG02 174 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 AMY1AP04745 511 aa15.44■□□□□ 0.06
SFSWAP-207ENST00000538548 HBZP02008 142 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 OR9G9P0C7N8 305 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 EFNB3Q15768 340 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 FBLN7Q53RD9 439 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 CENPWQ5EE01 88 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 HSD17B10Q99714 261 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 GSX1Q9H4S2 264 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 SEPSECSQ9HD40 501 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 OSTCQ9NRP0 149 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 IGHV1-69-2A0A0G2JMI3 117 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 OOEPA6NGQ2 149 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 TNFSF4P23510 183 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 VASH2Q86V25 355 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 FAM19A2Q8N3H0 131 aa15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 MAFAQ8NHW3 353 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 LSM4Q9Y4Z0 139 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-207ENST00000538548 GDF1P27539 372 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 ZNF439Q8NDP4 499 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 SSMEM1Q8WWF3 244 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 MRPL27Q9P0M9 148 aaKnown RBP15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 ARL2-SNX15V9GYD0 113 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 CACNA1DQ01668 2161 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 HELTA6NFD8 242 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 GDF9O60383 454 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 LPAL2Q16609 132 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 SPATA31B1PQ5VZV4 182 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 TUSC5Q8IXB3 177 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 ATOH7Q8N100 152 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 OR4C5Q8NGB2 326 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 CLEC7AQ9BXN2 247 aa15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 HEYLQ9NQ87 328 aaPredicted RBP15.42■□□□□ 0.06
SFSWAP-207ENST00000538548 A0A1W2PN81 502 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 FAM90A9PA6NNJ1 464 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 PSPNO60542 156 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 HAND1O96004 215 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 SSPNQ14714 243 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 MAJINQ3KP22 176 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 OR4P4Q8NGL7 312 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 HES4Q9HCC6 221 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 NTF3P20783 257 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 LINC00205P59089 165 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 SELENOVP59797 346 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 SLC35B1P78383 322 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 DOLPP1Q86YN1 238 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 MRGPRDQ8TDS7 321 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 RNASE7Q9H1E1 156 aaKnown RBP15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 NPVFQ9HCQ7 196 aa15.41■□□□□ 0.06
SFSWAP-207ENST00000538548 TRAV9-2A0A087WT02 112 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 IGLC7A0M8Q6 106 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 VDAC2P45880 294 aaPredicted RBP15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 OR1C1Q15619 314 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 PQLC2Q6ZP29 291 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 GCNT2Q8N0V5 402 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 STPG3Q8N7X2 389 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 OR2Y1Q8NGV0 311 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 LY6G6EA0A0G2JKS1 128 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 ISLRO14498 428 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 FOXH1O75593 365 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 IL11RAQ14626 422 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 TIGITQ495A1 244 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 SLC35E4Q6ICL7 350 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 OR4F17Q8NGA8 305 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 OR52E5Q8NH55 327 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 C1orf159Q96HA4 380 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 U3KQA8 63 aa15.4■□□□□ 0.06
SFSWAP-207ENST00000538548 GFRA3O60609 400 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 MT-CO3P00414 261 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 CGAP01215 116 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 APCSP02743 223 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 TCL1AP56279 114 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 FXYD3Q14802 87 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 PRAMEF5Q5TYX0 476 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 PRAMEF6Q5VXH4 476 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 LCN12Q6JVE5 192 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 MRPL54Q6P161 138 aaKnown RBP15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 MUC15Q8N387 334 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 OR4A16Q8NH70 328 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 IL19Q9UHD0 177 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 SMIM27A0A1W2PRY6 76 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 PPBPP02775 128 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 CEBPDP49716 269 aaPredicted RBP15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 DUSP23Q9BVJ7 150 aa15.39■□□□□ 0.05
SFSWAP-207ENST00000538548 TEPPQ6URK8 271 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 TIPARPQ7Z3E1 657 aaKnown RBP15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 C18orf32Q8TCD1 76 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 TRAV30A0A087WSZ9 112 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 PATE3B3GLJ2 98 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 CRYBB3P26998 211 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 SRYQ05066 204 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 AESQ08117 197 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 R4GN57 208 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 CACNA1HO95180 2353 aa15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 EP300Q09472 2414 aaPredicted RBP15.38■□□□□ 0.05
SFSWAP-207ENST00000538548 H0YJW9 148 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 RAB31Q13636 194 aa15.37■□□□□ 0.05
SFSWAP-207ENST00000538548 RNF151Q2KHN1 245 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms