RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 TLN1Q9Y490 2541 aaKnown RBP11.45□□□□□ -0.58
LIMK1-208ENST00000538333 C5orf52A6NGY3 159 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 VSTM5A8MXK1 200 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 SOX15O60248 233 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 YIF1AO95070 293 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 OPRK1P41145 380 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 CDC34P49427 236 aaPredicted RBP11.45□□□□□ -0.58
LIMK1-208ENST00000538333 ZNF343Q6P1L6 599 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 LYPD2Q6UXB3 125 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 Q8WTZ3 238 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 GATAD1Q8WUU5 269 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 RAB1CQ92928 201 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 SLC35D1Q9NTN3 355 aa11.45□□□□□ -0.58
LIMK1-208ENST00000538333 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 MYOD1P15172 320 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 PSMB3P49720 205 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 TMEM249Q2WGJ8 235 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 SLC24A4Q8NFF2 622 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 TMEM242Q9NWH2 141 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 CTSZQ9UBR2 303 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 UPK2O00526 184 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 IFNA4P05014 189 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 NPY1RP25929 384 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 RPL35P42766 123 aaKnown RBP11.44□□□□□ -0.58
LIMK1-208ENST00000538333 SNRPEP62304 92 aaKnown RBP11.44□□□□□ -0.58
LIMK1-208ENST00000538333 ARSJQ5FYB0 599 aaPredicted RBP11.44□□□□□ -0.58
LIMK1-208ENST00000538333 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
LIMK1-208ENST00000538333 CXCL1P09341 107 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 EFNB3Q15768 340 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 CYP2G1PQ6ZSU1 146 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 MRPL20Q9BYC9 149 aaKnown RBP11.43□□□□□ -0.58
LIMK1-208ENST00000538333 KAAG1Q9UBP8 84 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 KALRNO60229 2985 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 CACNA1AO00555 2505 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 KBTBD11O94819 623 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 CA2P00918 260 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 AKR1D1P51857 326 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 RND2P52198 227 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 ZNF596Q8TC21 504 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 NPVFQ9HCQ7 196 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 DYNLRB1Q9NP97 96 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 BET1LQ9NYM9 111 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
LIMK1-208ENST00000538333 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.42□□□□□ -0.58
LIMK1-208ENST00000538333 UBE2CO00762 179 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 NDUFB3O43676 98 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 PAGE4O60829 102 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 IGHV2-5P01817 119 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
LIMK1-208ENST00000538333 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
LIMK1-208ENST00000538333 APOBEC3AP31941 199 aaPredicted RBP11.42□□□□□ -0.58
LIMK1-208ENST00000538333 DLX6P56179 175 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 OR5AN1Q8NGI8 311 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 NAT8Q9UHE5 227 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 PXMP4Q9Y6I8 212 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 IGF2RP11717 2491 aa11.42□□□□□ -0.58
LIMK1-208ENST00000538333 H0YJW9 148 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 DVL1O14640 695 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 C8orf31Q8N9H6 132 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 OSR1Q8TAX0 266 aaPredicted RBP11.41□□□□□ -0.58
LIMK1-208ENST00000538333 H1FXQ92522 213 aaKnown RBP11.41□□□□□ -0.58
LIMK1-208ENST00000538333 PARLQ9H300 379 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
LIMK1-208ENST00000538333 ENY2Q9NPA8 101 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 CHD8Q9HCK8 2581 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 J3QR06 171 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 PLAUP00749 431 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 S100A6P06703 90 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 CA7P43166 264 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 LINC00311Q8N616 119 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 OR4F5Q8NH21 305 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 OR4F4Q96R69 305 aa11.41□□□□□ -0.58
LIMK1-208ENST00000538333 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 B9A039 149 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 FNDC10F2Z333 226 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 CLDN34H7C241 214 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 CD3EP07766 207 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.58
LIMK1-208ENST00000538333 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 FBXL19-AS1Q494R0 122 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 TEPPQ6URK8 271 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 ST6GALNAC6Q969X2 333 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
LIMK1-208ENST00000538333 PLEKHA3Q9HB20 300 aa11.4□□□□□ -0.58
LIMK1-208ENST00000538333 METTL1Q9UBP6 276 aaKnown RBP11.4□□□□□ -0.58
LIMK1-208ENST00000538333 IGHV1-69-2A0A0G2JMI3 117 aa11.4□□□□□ -0.59
LIMK1-208ENST00000538333 A0A1W2PPV4 95 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms