RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMEM155Q4W5P6 130 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 LCN15Q6UWW0 184 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 PDPNQ86YL7 162 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 SLC24A4Q8NFF2 622 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 OR5AN1Q8NGI8 311 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 OR9G1Q8NH87 305 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 H1FXQ92522 213 aaKnown RBP11.12□□□□□ -0.63
SMG6-203ENST00000536871 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 DMXL1Q9Y485 3027 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
SMG6-203ENST00000536871 A0A1W2PPE3 182 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 CXorf65A6NEN9 183 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 KBTBD11O94819 623 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 SNRNP70P08621 437 aaKnown RBP11.11□□□□□ -0.63
SMG6-203ENST00000536871 RAB4AP20338 218 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 NPY1RP25929 384 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 S100A2P29034 98 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 PSMB3P49720 205 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
SMG6-203ENST00000536871 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 ZNF672Q499Z4 452 aaPredicted RBP11.11□□□□□ -0.63
SMG6-203ENST00000536871 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 TGIF2LYQ8IUE0 185 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 ZCCHC24Q8N2G6 241 aaKnown RBP11.11□□□□□ -0.63
SMG6-203ENST00000536871 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
SMG6-203ENST00000536871 OR10X1Q8NGY0 326 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 CA5BP1Q8WTZ4 195 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 TMEM204Q9BSN7 226 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 PLEKHA3Q9HB20 300 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 SIRT7Q9NRC8 400 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 DYSFO75923 2080 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 CADP27708 2225 aa11.11□□□□□ -0.63
SMG6-203ENST00000536871 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 H3BQ15 152 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 J3QR06 171 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 MMP23AO75900 390 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 LOXP28300 417 aaPredicted RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 PKIAP61925 76 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 C1orf229Q6ZS94 237 aaPredicted RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 OR4C13Q8NGP0 309 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 TXNDC17Q9BRA2 123 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 VSIRQ9H7M9 311 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 hCG_1809904A0A1W2PP81 198 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 A0A1W2PPE2 198 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 A0A1W2PR64 198 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 A0A1W2PRV1 198 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 USF1P22415 310 aaPredicted RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 CACNA1DQ01668 2161 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 ACACAQ13085 2346 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 VKORC1L1Q8N0U8 176 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 CYB561D1Q8N8Q1 229 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 FLYWCH2Q96CP2 140 aaKnown RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
SMG6-203ENST00000536871 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 RALYQ9UKM9 306 aaKnown RBP11.1□□□□□ -0.63
SMG6-203ENST00000536871 PUS1Q9Y606 427 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMG6-203ENST00000536871 ZFP92A6NM28 416 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 DLX6P56179 175 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 SPINK9Q5DT21 86 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 C9orf152Q5JTZ5 239 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 MRPL41Q8IXM3 137 aaKnown RBP11.09□□□□□ -0.63
SMG6-203ENST00000536871 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 NEU1Q99519 415 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 LOC400499M0QZD8 3231 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 DSCAMO60469 2012 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 ZGRF1Q86YA3 2104 aa11.09□□□□□ -0.63
SMG6-203ENST00000536871 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 A0A1W2PN81 502 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 H0YJW9 148 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 CCL3L1P16619 93 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 CHRNA7P36544 502 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 CDC34P49427 236 aaPredicted RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 PRRX1P54821 245 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 MEF2BQ02080 365 aaPredicted RBP11.08□□□□□ -0.64
SMG6-203ENST00000536871 TFF3Q07654 80 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 SSX3Q99909 188 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 A0A1W2PPV4 95 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 RRHO14718 337 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 IGHV1-8P0DP01 117 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 ADORA2A-AS1P86434 159 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 HNF4GQ14541 408 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
SMG6-203ENST00000536871 PYY3Q5JQD4 70 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms