RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 OR4F5Q8NH21 305 aa12.3□□□□□ -0.44
CNN1-202ENST00000535659 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
CNN1-202ENST00000535659 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.3□□□□□ -0.44
CNN1-202ENST00000535659 TEX50A0A1B0GTY4 177 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 A0A1B0GU03 582 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 C7orf66A4D0T2 115 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 RBMXL2O75526 392 aaKnown RBP12.29□□□□□ -0.44
CNN1-202ENST00000535659 ADAP1O75689 374 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 GGNBP1Q5YKI7 109 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 FOXRED2Q8IWF2 684 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 ARPC1AQ92747 370 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 TMEM14BQ9NUH8 114 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
CNN1-202ENST00000535659 MSGN1A6NI15 193 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 AP4M1O00189 453 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 OPN1MWP04001 364 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 IGF1P05019 195 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 SULT1A3P0DMM9 295 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 SULT1A4P0DMN0 295 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 OPN1MW2P0DN77 364 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 OPN1MW3P0DN78 364 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 EGR2P11161 476 aaPredicted RBP12.28□□□□□ -0.44
CNN1-202ENST00000535659 SLC25A6P12236 298 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 MYOD1P15172 320 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 VDAC2P45880 294 aaPredicted RBP12.28□□□□□ -0.44
CNN1-202ENST00000535659 OR2B8PP59922 312 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 NDPQ00604 133 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 ABHD5Q8WTS1 349 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 SRSF12Q8WXF0 261 aaKnown RBP12.28□□□□□ -0.44
CNN1-202ENST00000535659 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 COA4Q9NYJ1 87 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 CACNG5Q9UF02 275 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
CNN1-202ENST00000535659 ALG5Q9Y673 324 aa12.28□□□□□ -0.44
CNN1-202ENST00000535659 E7EUB6 86 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 ATP6V0E1O15342 81 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.44
CNN1-202ENST00000535659 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.44
CNN1-202ENST00000535659 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
CNN1-202ENST00000535659 SMCO1Q147U7 214 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 TMEM95Q3KNT9 176 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 KRTAP24-1Q3LI83 254 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 C10orf55Q5SWW7 151 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 OR5B3Q8NH48 314 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 SGMS2Q8NHU3 365 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 GRPEL2Q8TAA5 225 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.44
CNN1-202ENST00000535659 QTRT1Q9BXR0 403 aaKnown RBP12.27□□□□□ -0.44
CNN1-202ENST00000535659 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 ZNF257Q9Y2Q1 563 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 FBXO7Q9Y3I1 522 aa12.27□□□□□ -0.44
CNN1-202ENST00000535659 CLPSL1A2RUU4 121 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 SSNA1O43805 119 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 AKIRIN2Q53H80 203 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 LFNGQ8NES3 379 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 NOL4LQ96MY1 436 aaPredicted RBP12.27□□□□□ -0.45
CNN1-202ENST00000535659 FYTTD1Q96QD9 318 aaKnown RBP12.27□□□□□ -0.45
CNN1-202ENST00000535659 SPIN2AQ99865 258 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 SPIN2BQ9BPZ2 258 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 WSB1Q9Y6I7 421 aa12.27□□□□□ -0.45
CNN1-202ENST00000535659 A0A1B0GUS0 222 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 TMEM89A2RUT3 159 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 MPTX1A8MV57 137 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 ST8SIA3O43173 380 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 PITX3O75364 302 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 IFNA17P01571 189 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 TRAPPC2P0DI81 140 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 TRAPPC2BP0DI82 140 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 CRIP2P52943 208 aaPredicted RBP12.26□□□□□ -0.45
CNN1-202ENST00000535659 FOXL1Q12952 345 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 THOC7Q6I9Y2 204 aaKnown RBP12.26□□□□□ -0.45
CNN1-202ENST00000535659 STPG2Q8N412 459 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 OR1S1Q8NH92 325 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 OR10C1Q96KK4 312 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 PDCD10Q9BUL8 212 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 GON7Q9BXV9 100 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 NDUFA4L2Q9NRX3 87 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 ATRQ13535 2644 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 TNCP24821 2201 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 PLXNB1O43157 2135 aa12.26□□□□□ -0.45
CNN1-202ENST00000535659 TRAV41A0A0B4J266 112 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 C13orf42A0A1B0GVH6 325 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 A0A1B0GW64 132 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 CGB1A6NKQ9 187 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 G3V318 75 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
CNN1-202ENST00000535659 C2orf68Q2NKX9 166 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 UNQ5815/PRO19632Q6UWF5 114 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
CNN1-202ENST00000535659 OR52E5Q8NH55 327 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 TMEM158Q8WZ71 300 aa12.25□□□□□ -0.45
CNN1-202ENST00000535659 TMEM68Q96MH6 324 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms