RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TIMM50Q3ZCQ8 353 aa12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 RBPMS2Q6ZRY4 209 aaKnown RBP12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 CCL28Q9NRJ3 127 aa12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
CAPRIN1-216ENST00000534042 CGB1A6NKQ9 187 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 FCGR2CP31995 323 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 ARPC4P59998 168 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 MSMO1Q15800 293 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 ZNF585BQ52M93 769 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 UNQ9165/PRO28630Q6UXU0 137 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 TPRA1Q86W33 373 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 SPAG16Q8N0X2 631 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 OR1L6Q8NGR2 347 aa12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 TXNL4BQ9NX01 149 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 MRPL27Q9P0M9 148 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 RRP15Q9Y3B9 282 aaKnown RBP12.6□□□□□ -0.39
CAPRIN1-216ENST00000534042 CXorf65A6NEN9 183 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 C8orf88P0DMB2 117 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 FGF9P31371 208 aaPredicted RBP12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 GPR183P32249 361 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 OR2B8PP59922 312 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 ZBTB34Q8NCN2 500 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 BEST4Q8NFU0 473 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 OR13F1Q8NGS4 319 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 LINC00476Q8WZB0 136 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 RHBDL2Q9NX52 303 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 THYN1Q9P016 225 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
CAPRIN1-216ENST00000534042 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 RBFOX2O43251 390 aaKnown RBP eCLIP12.58□□□□□ -0.48e-9■■■□□ 16.8
CAPRIN1-216ENST00000534042 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 CATR1Q13166 79 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 SLC38A6Q8IZM9 456 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 ZNF502Q8TBZ5 544 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 COMMD5Q9GZQ3 224 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
CAPRIN1-216ENST00000534042 TRAV18A0A075B6X5 111 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 IGLC7A0M8Q6 106 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 SULT1C2O00338 296 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 UPK2O00526 184 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 MRPS14O60783 128 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 LY6G6CO95867 125 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 HPRT1P00492 218 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 PPYP01298 95 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 PTHLHP12272 177 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 NQO2P16083 231 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 PSMB9P28065 219 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 TAS2R31P59538 309 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 SFXN4Q6P4A7 337 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 OR2C3Q8N628 320 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 GVQW1Q8N7I0 195 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 SRSF8Q9BRL6 282 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
CAPRIN1-216ENST00000534042 TRAV3A0A0B4J244 114 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 A0A0J9YWU9 116 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 CYB5BO43169 146 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 PTBP1P26599 531 aaKnown RBP eCLIP12.56□□□□□ -0.43e-7■■■■□ 20.2
CAPRIN1-216ENST00000534042 APOC4P55056 127 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 POU2AF1Q16633 256 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 HOGA1Q86XE5 327 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 SPAG8Q99932 426 aaPredicted RBP12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 ZNF436Q9C0F3 470 aaPredicted RBP12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 TP53TG1Q9Y2A0 90 aa12.56□□□□□ -0.4
CAPRIN1-216ENST00000534042 NUPR2A6NF83 97 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 TGOLN2O43493 480 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 SPRY2O43597 315 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 BMI1P35226 326 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 FXYD4P59646 89 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 TNFRSF9Q07011 255 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 ZNF773Q6PK81 442 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 Q6ZWC4 215 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 DMBX1Q8NFW5 382 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 CD300LFQ8TDQ1 290 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 VN1R17PQ8TDU5 208 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 QTRT1Q9BXR0 403 aaKnown RBP12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
CAPRIN1-216ENST00000534042 UBE2CO00762 179 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 FCER2P06734 321 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 SDC2P34741 201 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 SCAND1P57086 179 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 MXD1Q05195 221 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 AADACL3Q5VUY0 350 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 SLC25A24Q6NUK1 477 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 SPARTQ8N0X7 666 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 OR10W1Q8NGF6 305 aa12.54□□□□□ -0.4
CAPRIN1-216ENST00000534042 OR5H6Q8NGV6 325 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms