RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 PRAMEF5Q5TYX0 476 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 LHFPL4Q7Z7J7 247 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 MDS2Q8NDY4 140 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 VN1R17PQ8TDU5 208 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 PLCE1Q9P212 2302 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 TRAV3A0A0B4J244 114 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 RRHO14718 337 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 TNFSF13O75888 250 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 RPL39P5Q59GN2 51 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 MIC13Q5XKP0 118 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 WDR82Q6UXN9 313 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 ACP7Q6ZNF0 438 aa16.07■□□□□ 0.16
CAPN1-226ENST00000533820 CENPVQ7Z7K6 275 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-226ENST00000533820 IGHV3OR15-7A0A075B7D8 119 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 IL3RAP26951 378 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 ACOT6Q3I5F7 207 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-226ENST00000533820 COA6Q5JTJ3 125 aaKnown RBP16.06■□□□□ 0.16
CAPN1-226ENST00000533820 IQCF6A8MYZ5 107 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 F6UZH7 168 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 LINC01551Q86U37 167 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 TMEM170AQ8WVE7 144 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 VAMP8Q9BV40 100 aa16.06■□□□□ 0.16
CAPN1-226ENST00000533820 M0R1X1 148 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 GOSR1O95249 250 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 GPR12P47775 334 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 UTF1Q5T230 341 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 VWA1Q6PCB0 445 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 WFDC8Q8IUA0 241 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 ZCCHC14Q8WYQ9 949 aaKnown RBP16.05■□□□□ 0.16
CAPN1-226ENST00000533820 ZNF430Q9H8G1 570 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-226ENST00000533820 OR6C3Q9NZP0 311 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 CACNA1HO95180 2353 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 C17orf112F2Z3M2 114 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 RAB29O14966 203 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 PROP1O75360 226 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 EIF4EBP1Q13541 118 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-226ENST00000533820 SLC35E4Q6ICL7 350 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 ORAOV1Q8WV07 137 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 CORO2AQ92828 525 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 ARL14EPLP0DKL9 152 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 MRPL52Q86TS9 123 aaKnown RBP16.05■□□□□ 0.16
CAPN1-226ENST00000533820 HINT2Q9BX68 163 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 IL19Q9UHD0 177 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 DUSP13Q9UII6 198 aa16.05■□□□□ 0.16
CAPN1-226ENST00000533820 GRIFINA4D1Z8 144 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 BMI1P35226 326 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 ZBTB34Q8NCN2 500 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 SGMS2Q8NHU3 365 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 LRRC29Q8WV35 223 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 C20orf144Q9BQM9 153 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 TRAPPC1Q9Y5R8 145 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-226ENST00000533820 RBFOX2O43251 390 aaKnown RBP eCLIP16.04■□□□□ 0.161e-5■■■■□ 19.7
CAPN1-226ENST00000533820 GABRA6Q16445 453 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 PDLIM3Q53GG5 364 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-226ENST00000533820 TGIF2LYQ8IUE0 185 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 OR4A16Q8NH70 328 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 ANAPC16Q96DE5 110 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 ACY3Q96HD9 319 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 TAAR6Q96RI8 345 aa16.04■□□□□ 0.16
CAPN1-226ENST00000533820 C21orf140B9A014 251 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 HINT1P49773 126 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-226ENST00000533820 FBLN7Q53RD9 439 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 ACTL10Q5JWF8 245 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 KCNIP4Q6PIL6 250 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 CD177Q8N6Q3 437 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 Q8N7P7 452 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 TET2Q6N021 2002 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-226ENST00000533820 TRBV20OR9-2A0A075B6H5 130 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 CDKN1AP38936 164 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 SRSF6Q13247 344 aaKnown RBP16.03■□□□□ 0.16
CAPN1-226ENST00000533820 OR2Z1Q8NG97 314 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 HES4Q9HCC6 221 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 SCO2A0A1W2PP80 73 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 SPINT2O43291 252 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 TMEM183BQ1AE95 376 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 MS4A5Q9H3V2 200 aa16.03■□□□□ 0.16
CAPN1-226ENST00000533820 SMG1Q96Q15 3661 aaKnown RBP16.02■□□□□ 0.16
CAPN1-226ENST00000533820 CNN1P51911 297 aaKnown RBP16.02■□□□□ 0.16
CAPN1-226ENST00000533820 ZNRF1Q8ND25 227 aa16.02■□□□□ 0.16
CAPN1-226ENST00000533820 Q8TCH9 128 aa16.02■□□□□ 0.16
CAPN1-226ENST00000533820 WFDC12Q8WWY7 111 aa16.02■□□□□ 0.16
CAPN1-226ENST00000533820 GMPPAQ96IJ6 420 aaPredicted RBP16.02■□□□□ 0.16
CAPN1-226ENST00000533820 IMMP2LQ96T52 175 aa16.02■□□□□ 0.16
CAPN1-226ENST00000533820 GCH1P30793 250 aa16.02■□□□□ 0.15
CAPN1-226ENST00000533820 PDLIM4P50479 330 aa16.02■□□□□ 0.15
CAPN1-226ENST00000533820 CXXC4Q9H2H0 198 aa16.02■□□□□ 0.15
CAPN1-226ENST00000533820 WDR83OSQ9Y284 106 aa16.02■□□□□ 0.15
CAPN1-226ENST00000533820 MGAQ8IWI9 3026 aa16.02■□□□□ 0.15
CAPN1-226ENST00000533820 MYOD1P15172 320 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 VAMP3Q15836 100 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 OCIAD2Q56VL3 154 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 FAM201AQ5SY85 155 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 LOXL4Q96JB6 756 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 FER1L6-AS2Q96M78 137 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 CECR9P0C854 216 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 CCL11P51671 97 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 SPATA31B1PQ5VZV4 182 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 TREML4Q6UXN2 200 aa16.01■□□□□ 0.15
CAPN1-226ENST00000533820 HSD17B10Q99714 261 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms