RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 RAB11AP62491 216 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 FAM71F2Q6NXP2 309 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 FAM122CQ6P4D5 195 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 CYB561D1Q8N8Q1 229 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 OR10G4Q8NGN3 311 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 OR10G9Q8NGN4 311 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 OR10G7Q8NGN6 311 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 ENY2Q9NPA8 101 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 RPS10P5Q9NQ39 176 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 BET1LQ9NYM9 111 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 ZNF257Q9Y2Q1 563 aa23.15■■□□□ 1.3
SAMD1-202ENST00000533683 MALRD1Q5VYJ5 2156 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 C17orf112F2Z3M2 114 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 SNRNP70P08621 437 aaKnown RBP23.14■■□□□ 1.3
SAMD1-202ENST00000533683 AVPI1Q5T686 147 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 SLC24A4Q8NFF2 622 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 NABP2Q9BQ15 211 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 HINT2Q9BX68 163 aa23.14■■□□□ 1.3
SAMD1-202ENST00000533683 UNKLQ9H9P5 680 aaKnown RBP23.14■■□□□ 1.3
SAMD1-202ENST00000533683 SMCO3A2RU48 225 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 C7orf77A4D0Y5 90 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 KBTBD11O94819 623 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 BCL2P10415 239 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 CTRB1P17538 263 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 CEBPGP53567 150 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 CTRB2Q6GPI1 263 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 HARBI1Q96MB7 349 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 SLC25A22Q9H936 323 aa23.14■■□□□ 1.29
SAMD1-202ENST00000533683 NPY1RP25929 384 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 ZNF137PP52743 207 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 TMEM177Q53S58 311 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 TREML4Q6UXN2 200 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 LHX4Q969G2 390 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 TMEM133Q9H2Q1 129 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 LY6HO94772 140 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 OPN1MWP04001 364 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 OPN1MW2P0DN77 364 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 OPN1MW3P0DN78 364 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 DLK1P80370 383 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 RAB1BQ9H0U4 201 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 CBLN4Q9NTU7 201 aa23.13■■□□□ 1.29
SAMD1-202ENST00000533683 PUS1Q9Y606 427 aaKnown RBP eCLIP23.13■■□□□ 1.29
SAMD1-202ENST00000533683 CA2P00918 260 aa23.12■■□□□ 1.29
SAMD1-202ENST00000533683 PRCDQ00LT1 54 aa23.12■■□□□ 1.29
SAMD1-202ENST00000533683 FLYWCH2Q96CP2 140 aaKnown RBP23.12■■□□□ 1.29
SAMD1-202ENST00000533683 SMCO4Q9NRQ5 59 aa23.12■■□□□ 1.29
SAMD1-202ENST00000533683 SPTBN1Q01082 2364 aaKnown RBP23.12■■□□□ 1.29
SAMD1-202ENST00000533683 CTXND1A0A1B0GTU2 59 aa23.11■■□□□ 1.29
SAMD1-202ENST00000533683 TEX50A0A1B0GTY4 177 aa23.11■■□□□ 1.29
SAMD1-202ENST00000533683 CACNA1AO00555 2505 aa23.11■■□□□ 1.29
SAMD1-202ENST00000533683 HMGB3O15347 200 aaKnown RBP23.11■■□□□ 1.29
SAMD1-202ENST00000533683 C11orf71Q6IPW1 123 aa23.11■■□□□ 1.29
SAMD1-202ENST00000533683 PLEKHA3Q9HB20 300 aa23.11■■□□□ 1.29
SAMD1-202ENST00000533683 MPDU1O75352 247 aa23.1■■□□□ 1.29
SAMD1-202ENST00000533683 SOD3P08294 240 aa23.1■■□□□ 1.29
SAMD1-202ENST00000533683 FKBP11Q9NYL4 201 aa23.1■■□□□ 1.29
SAMD1-202ENST00000533683 PDPNQ86YL7 162 aa23.1■■□□□ 1.29
SAMD1-202ENST00000533683 OR4C13Q8NGP0 309 aa23.1■■□□□ 1.29
SAMD1-202ENST00000533683 ACTR3CQ9C0K3 210 aaPredicted RBP23.1■■□□□ 1.29
SAMD1-202ENST00000533683 DLX1P56177 255 aa23.09■■□□□ 1.29
SAMD1-202ENST00000533683 PMS2P11Q13670 270 aa23.09■■□□□ 1.29
SAMD1-202ENST00000533683 TGIF2LXQ8IUE1 241 aa23.09■■□□□ 1.29
SAMD1-202ENST00000533683 H3BQ15 152 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 OR5B3Q8NH48 314 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 RAB24Q969Q5 203 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 MGST2Q99735 147 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 DEFA4P12838 97 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 RHEBQ15382 184 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 ACOT6Q3I5F7 207 aaPredicted RBP23.08■■□□□ 1.29
SAMD1-202ENST00000533683 ARSJQ5FYB0 599 aaPredicted RBP23.08■■□□□ 1.29
SAMD1-202ENST00000533683 C1orf159Q96HA4 380 aa23.08■■□□□ 1.29
SAMD1-202ENST00000533683 PCGF1Q9BSM1 259 aa23.07■■□□□ 1.28
SAMD1-202ENST00000533683 TMPRSS5Q9H3S3 457 aa23.07■■□□□ 1.28
SAMD1-202ENST00000533683 VAX2Q9UIW0 290 aa23.07■■□□□ 1.28
SAMD1-202ENST00000533683 WASHC3Q9Y3C0 194 aa23.07■■□□□ 1.28
SAMD1-202ENST00000533683 NPVFQ9HCQ7 196 aa23.07■■□□□ 1.28
SAMD1-202ENST00000533683 PKD1L2Q7Z442 2459 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 IGHV2-26A0A0B4J1V2 119 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 COLCA2A8K830 154 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 CYB5BO43169 146 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 IFNA1P01562 189 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 GCSAMLQ5JQS6 135 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 LSM4Q9Y4Z0 139 aaKnown RBP23.06■■□□□ 1.28
SAMD1-202ENST00000533683 PPIAL4CA0A0B4J2A2 164 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 PPIAL4GP0DN37 164 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 OPRK1P41145 380 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 CTAG1AP78358 180 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 PRB3Q04118 309 aaPredicted RBP23.06■■□□□ 1.28
SAMD1-202ENST00000533683 WDR25Q64LD2 544 aaPredicted RBP23.06■■□□□ 1.28
SAMD1-202ENST00000533683 OR8B3Q8NGG8 313 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 OR8B2Q96RD0 313 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 GGTLC1Q9BX51 225 aa23.06■■□□□ 1.28
SAMD1-202ENST00000533683 IL3RAP26951 378 aa23.05■■□□□ 1.28
SAMD1-202ENST00000533683 UQCRFS1P47985 274 aa23.05■■□□□ 1.28
SAMD1-202ENST00000533683 RPL8P62917 257 aaKnown RBP23.05■■□□□ 1.28
SAMD1-202ENST00000533683 TNFRSF14Q92956 283 aa23.05■■□□□ 1.28
SAMD1-202ENST00000533683 MIOXQ9UGB7 285 aa23.05■■□□□ 1.28
SAMD1-202ENST00000533683 IGLV1-47P01700 117 aa23.04■■□□□ 1.28
SAMD1-202ENST00000533683 IGLV2-23P01705 113 aa23.04■■□□□ 1.28
SAMD1-202ENST00000533683 FAM90A2PQ658T7 463 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms