RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 DAZ1Q9NQZ3 744 aaKnown RBP8.57□□□□□ -1.04
CMTM1-216ENST00000533078 FKBP14Q9NWM8 211 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 SPATA2Q9UM82 520 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 KCNK7Q9Y2U2 307 aa8.57□□□□□ -1.04
CMTM1-216ENST00000533078 RRP15Q9Y3B9 282 aaKnown RBP8.57□□□□□ -1.04
CMTM1-216ENST00000533078 IGLV11-55A0A075B6I3 123 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 MFSD2BA6NFX1 497 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 RAB6AP20340 208 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 ZNF66Q6ZN08 573 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 PUSL1Q8N0Z8 303 aaKnown RBP8.56□□□□□ -1.04
CMTM1-216ENST00000533078 C2CD4CQ8TF44 421 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 GFI1Q99684 422 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 RARRES2Q99969 163 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
CMTM1-216ENST00000533078 PKHD1P08F94 4074 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 MPTX1A8MV57 137 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 RAB27BO00194 218 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 TGOLN2O43493 480 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 NFYAP23511 347 aaPredicted RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 RPS25P62851 125 aaKnown RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 RPL30P62888 115 aaKnown RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 LAIR2Q6ISS4 152 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 SPSB3Q6PJ21 355 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 TMEM91Q6ZNR0 172 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 MFSD4AQ8N468 514 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 ZNF502Q8TBZ5 544 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 TMEM190Q8WZ59 177 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 BSCL2Q96G97 398 aaPredicted RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 CMTM3Q96MX0 182 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 SRSF8Q9BRL6 282 aaKnown RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 ZNF436Q9C0F3 470 aaPredicted RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 ACOT13Q9NPJ3 140 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 BET1LQ9NYM9 111 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 TAS2R8Q9NYW2 309 aa8.55□□□□□ -1.04
CMTM1-216ENST00000533078 LSM2Q9Y333 95 aaKnown RBP8.55□□□□□ -1.04
CMTM1-216ENST00000533078 E7EUB6 86 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 MYL9P24844 172 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 NANOS2P60321 138 aaKnown RBP8.54□□□□□ -1.04
CMTM1-216ENST00000533078 MLLT11Q13015 90 aaPredicted RBP8.54□□□□□ -1.04
CMTM1-216ENST00000533078 RCN1Q15293 331 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 ODF3L2Q3SX64 289 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 THOC7Q6I9Y2 204 aaKnown RBP8.54□□□□□ -1.04
CMTM1-216ENST00000533078 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
CMTM1-216ENST00000533078 CD300LFQ8TDQ1 290 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 VN1R17PQ8TDU5 208 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 ATG5Q9H1Y0 275 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 DCSTAMPQ9H295 470 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 C11orf68Q9H3H3 251 aaKnown RBP8.54□□□□□ -1.04
CMTM1-216ENST00000533078 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 TPRKBQ9Y3C4 175 aa8.54□□□□□ -1.04
CMTM1-216ENST00000533078 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 NDUFA4O00483 81 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 SCGNO76038 276 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 RPA2P15927 270 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
CMTM1-216ENST00000533078 ADMP35318 185 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 GNG2P59768 71 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 ARPC4P59998 168 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 PLA2G7Q13093 441 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 CATR1Q13166 79 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 TIMM50Q3ZCQ8 353 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 SLC25A24Q6NUK1 477 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 OR11H2Q8NH07 326 aa8.53□□□□□ -1.04
CMTM1-216ENST00000533078 QTRT1Q9BXR0 403 aaKnown RBP8.53□□□□□ -1.04
CMTM1-216ENST00000533078 IGKV1D-8A0A087WSZ0 117 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 A0A1B0GW64 132 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 IFITM5A6NNB3 132 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 C11orf94C9JXX5 98 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 RGS10O43665 173 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.05
CMTM1-216ENST00000533078 CTSDP07339 412 aaPredicted RBP8.52□□□□□ -1.05
CMTM1-216ENST00000533078 NQO2P16083 231 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 TAS2R31P59538 309 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 OR2B8PP59922 312 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 FABP5Q01469 135 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 IRF3Q14653 427 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 CDNFQ49AH0 187 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 HACD4Q5VWC8 232 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 NR2C2APQ86WQ0 139 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 GDPD1Q8N9F7 314 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 UBAC2Q8NBM4 344 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 DMBX1Q8NFW5 382 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 SECTM1Q8WVN6 248 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 ATP6V0BQ99437 205 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 DNAH2Q9P225 4427 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 FAT2Q9NYQ8 4349 aa8.52□□□□□ -1.05
CMTM1-216ENST00000533078 TRAV1-2A0A0B4J238 106 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms