RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GPR31O00270 319 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 S1PR2O95136 353 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 GABARAPO95166 117 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 RLN1P04808 185 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 MYOD1P15172 320 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 AREGP15514 252 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 HIST1H1BP16401 226 aaKnown RBP13.16□□□□□ -0.3
PHRF1-204ENST00000532550 S100GP29377 79 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 ERVK-16P61578 105 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
PHRF1-204ENST00000532550 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 PEMTQ9UBM1 199 aa13.16□□□□□ -0.3
PHRF1-204ENST00000532550 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 A0A1B0GW64 132 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 BMPR1BO00238 502 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 CSN3P07498 182 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 RPA2P15927 270 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 CTRB1P17538 263 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 RCVRNP35243 200 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 LPAR6P43657 344 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 OR2B8PP59922 312 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 IL34Q6ZMJ4 242 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 GPR141Q7Z602 305 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 DGCR14Q96DF8 476 aaKnown RBP13.15□□□□□ -0.3
PHRF1-204ENST00000532550 U3KQK5 164 aa13.15□□□□□ -0.3
PHRF1-204ENST00000532550 NDUFB8O95169 186 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 REG1AP05451 166 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 FXYD6Q9H0Q3 95 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 SIGLEC8Q9NYZ4 499 aa13.14□□□□□ -0.31
PHRF1-204ENST00000532550 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
PHRF1-204ENST00000532550 KRASP01116 189 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 FGF2P09038 288 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 FCAMRQ8WWV6 532 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
PHRF1-204ENST00000532550 EXTL2Q9UBQ6 330 aa13.13□□□□□ -0.31
PHRF1-204ENST00000532550 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 SNAPC5O75971 98 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 OR2C1O95371 312 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 IFNA6P05013 189 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 TRAPPC2P0DI81 140 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 TRAPPC2BP0DI82 140 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 KLK9Q2XQG4 91 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 C15orf40Q8WUR7 153 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 QTRT1Q9BXR0 403 aaKnown RBP13.12□□□□□ -0.31
PHRF1-204ENST00000532550 THYN1Q9P016 225 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 KLK9Q9UKQ9 250 aa13.12□□□□□ -0.31
PHRF1-204ENST00000532550 IGLV11-55A0A075B6I3 123 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 IGLC7A0M8Q6 106 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 CYB5BO43169 146 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 TPPPO94811 219 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
PHRF1-204ENST00000532550 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 G6PCP35575 357 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 ARL3P36405 182 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 ALDH3B2P48448 385 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 UCP3P55916 312 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 RNASE12Q5GAN4 147 aaKnown RBP13.11□□□□□ -0.31
PHRF1-204ENST00000532550 THOC7Q6I9Y2 204 aaKnown RBP13.11□□□□□ -0.31
PHRF1-204ENST00000532550 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 HSD17B13Q7Z5P4 300 aaPredicted RBP13.11□□□□□ -0.31
PHRF1-204ENST00000532550 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 SLC38A6Q8IZM9 456 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 CADM3Q8N126 398 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 Q8N1Y9 231 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 Q8N402 240 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 CXorf58Q96LI9 332 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 S4R3C0 116 aa13.11□□□□□ -0.31
PHRF1-204ENST00000532550 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 M0QYG6 137 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 FAM106AQ4KMX7 169 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 TBC1D26Q86UD7 250 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 HINT2Q9BX68 163 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 FAM212BQ9NTI7 297 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-204ENST00000532550 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
PHRF1-204ENST00000532550 RGS5O15539 181 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 CLEC3BP05452 202 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 OR13C7P0DN81 318 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
PHRF1-204ENST00000532550 RNASE10Q5GAN6 216 aaKnown RBP13.09□□□□□ -0.31
PHRF1-204ENST00000532550 GTSCR1Q86UQ5 136 aa13.09□□□□□ -0.31
PHRF1-204ENST00000532550 CLVS1Q8IUQ0 354 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms