RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 MED29Q9NX70 200 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 PAIP2BQ9ULR5 123 aaKnown RBP2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 UHRF1BP1Q6BDS2 1440 aa2.75□□□□□ -1.97
AC055878.1-201ENST00000531858 ABCC12Q96J65 1359 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 RPRD2Q5VT52 1461 aaKnown RBP2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 BORCS7-ASMTA0A0B4J1R7 106 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 C17orf51A8MQB3 221 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 UBE2L6O14933 153 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 LECT2O14960 151 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 CGAP01215 116 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF19P17023 458 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BOP23527 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BBP33778 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 TGFBR1P36897 503 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 GABRA2P47869 451 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 RBM11P57052 281 aaKnown RBP2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BDP58876 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 RPS11P62280 158 aaKnown RBP eCLIP2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BCP62807 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST2H2BEQ16778 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 SPINK14Q6IE38 97 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 SSX8Q7RTT4 187 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 OR10D4PQ8NGN7 298 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 SLC25A40Q8TBP6 338 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 LMX1AQ8TE12 382 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BHQ93079 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BNQ99877 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 HIST1H2BMQ99879 126 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 RTL8AQ9BWD3 113 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 C11orf68Q9H3H3 251 aaKnown RBP2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 SMDT1Q9H4I9 107 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 RASL12Q9NYN1 266 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 JPT1Q9UK76 154 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 ICOSQ9Y6W8 199 aa2.74□□□□□ -1.97
AC055878.1-201ENST00000531858 CHD2O14647 1828 aaKnown RBP2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 BAZ1BQ9UIG0 1483 aaKnown RBP2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 DUXBA0A1W2PPF3 345 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CYSRT1A8MQ03 144 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 A8MWP6 167 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 IGHV3-53P01767 116 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 TRGV3P03979 118 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 PRM2P04554 102 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 GPX2P18283 190 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CRYBB3P26998 211 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CRABP2P29373 138 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 PIGPP57054 158 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 TPI1P60174 286 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 AP1S1P61966 158 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF616Q08AN1 781 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 RHEBQ15382 184 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 SLC25A34Q6PIV7 304 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 ZFP2Q6ZN57 461 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 DAND5Q8N907 189 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF709Q8N972 641 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 MBD3L1Q8WWY6 194 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 RBPMSQ93062 196 aaKnown RBP2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CAPZA3Q96KX2 299 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 AICDAQ9GZX7 198 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 FAM107BQ9H098 131 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 TUBA4BQ9H853 241 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 RPS10P5Q9NQ39 176 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 GSKIPQ9P0R6 139 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CELA1Q9UNI1 258 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 CYSLTR1Q9Y271 337 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 NUBP2Q9Y5Y2 271 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 S4R3C0 116 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 DYSFO75923 2080 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 PIKFYVEQ9Y2I7 2098 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 HECW2Q9P2P5 1572 aa2.73□□□□□ -1.97
AC055878.1-201ENST00000531858 PTPRJQ12913 1337 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNFX1Q9P2E3 1918 aaKnown RBP2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 IGKV1OR2-108A0A075B7D4 117 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 A0A1B0GX51 115 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 A6NED7 52 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 A8MUU9 505 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 H3BQ85 93 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 CSN2P05814 226 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 ZNF286BP0CG31 522 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 SMIM17P0DL12 118 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 MUC1P15941 1255 aaPredicted RBP2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 SLC25A16P16260 332 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 S100A7P31151 101 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 CSN1S1P47710 185 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 PSMD8P48556 350 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 FXYD7P58549 80 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 NDPQ00604 133 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 BRMS1LQ5PSV4 323 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 TCF24Q7RTU0 167 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 OR5J2Q8NH18 312 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 THEM6Q8WUY1 208 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 H1FXQ92522 213 aaKnown RBP2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 RNASE6Q93091 150 aaKnown RBP2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 MGLLQ99685 303 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 TM2D3Q9BRN9 247 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 DOHHQ9BU89 302 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 PLA2G2FQ9BZM2 168 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 TMEM138Q9NPI0 162 aa2.72□□□□□ -1.97
AC055878.1-201ENST00000531858 OR5V1Q9UGF6 321 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms