RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 OR4A16Q8NH70 328 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 SRSF12Q8WXF0 261 aaKnown RBP13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 RBPMSQ93062 196 aaKnown RBP13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 TPSG1Q9NRR2 321 aa13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 TSSC4Q9Y5U2 329 aaPredicted RBP13.81□□□□□ -0.2
PACSIN3-202ENST00000524509 FAM240BA0A1B0GVZ2 78 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 TCRBV4S1A1TA0A5B7 111 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 LINC01548A6NM66 108 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 PLA2G10O15496 165 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 CYB5BO43169 146 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 DHFRP00374 187 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 G6PCP35575 357 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 CCR6P51684 374 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 CD83Q01151 205 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 PJVKQ0ZLH3 352 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 LGI3Q8N145 548 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 MINDY2Q8NBR6 621 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 OR5B3Q8NH48 314 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 RBMXL1Q96E39 390 aaKnown RBP13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM56Q96MV1 263 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 SLA2Q9H6Q3 261 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM56-RWDD3S4R434 201 aa13.8□□□□□ -0.2
PACSIN3-202ENST00000524509 DUXBA0A1W2PPF3 345 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 MSGN1A6NI15 193 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 RBMXL2O75526 392 aaKnown RBP13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 BRI3O95415 125 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 PPIFP30405 207 aaKnown RBP13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 CFHR3Q02985 330 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 SRSF4Q08170 494 aaKnown RBP13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 C2orf68Q2NKX9 166 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 SP6Q3SY56 376 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 ZNF329Q86UD4 541 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 RNF152Q8N8N0 203 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 ADAD2Q8NCV1 583 aaKnown RBP13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 LFNGQ8NES3 379 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 OR1L8Q8NGR8 309 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 ALX4Q9H161 411 aaPredicted RBP13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
PACSIN3-202ENST00000524509 A0A1W2PN81 502 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 ARPC1BO15143 372 aaKnown RBP13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 VAMP1P23763 118 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 CHRNA7P36544 502 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 NDPQ00604 133 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 LSM10Q969L4 123 aaKnown RBP13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 TMEM230Q96A57 120 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 PDCD10Q9BUL8 212 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 ZNF257Q9Y2Q1 563 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 NBEAL2Q6ZNJ1 2754 aa13.78□□□□□ -0.2
PACSIN3-202ENST00000524509 A0A0B4J2A0 478 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 IGLV1-40P01703 118 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 TCRBP04435 133 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 CD28P10747 220 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 EGR2P11161 476 aaPredicted RBP13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 PSMB8P28062 276 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 TMEM187Q14656 261 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 MRGPRG-AS1Q2M3A8 158 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 ZNF429Q86V71 674 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 SHPKQ9UHJ6 478 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 OR51B2Q9Y5P1 312 aa13.77□□□□□ -0.21
PACSIN3-202ENST00000524509 A0A0G2JLM5 398 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 C15orf61A6NNL5 157 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 G3V318 75 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 SFT2D2O95562 160 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 OR9G9P0C7N8 305 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 TRAPPC2P0DI81 140 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 TRAPPC2BP0DI82 140 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 BTCP35070 178 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 TTC9CQ8N5M4 171 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 OR4F17Q8NGA8 305 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 FAM110DQ8TAY7 271 aaPredicted RBP13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 FYTTD1Q96QD9 318 aaKnown RBP13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 OR4F4Q96R69 305 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 FAM103A1Q9BTL3 118 aaKnown RBP13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 C20orf85Q9H1P6 137 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 TMEM14BQ9NUH8 114 aa13.76□□□□□ -0.21
PACSIN3-202ENST00000524509 PF4V1P10720 104 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 RAB9AP51151 201 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 OR2B8PP59922 312 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 KRTAP10-3P60369 221 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 SUPT4H1P63272 117 aaKnown RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 SSBP2P81877 361 aaPredicted RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 FAM209BQ5JX69 171 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 SELENOHQ8IZQ5 122 aaKnown RBP13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 LRTM2Q8N967 370 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 OR1L6Q8NGR2 347 aa13.75□□□□□ -0.21
PACSIN3-202ENST00000524509 UBE2E2Q96LR5 201 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms