RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 MRPL27Q9P0M9 148 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 VPS29Q9UBQ0 182 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 DNAJC12Q9UKB3 198 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 SLC22A13Q9Y226 551 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 COQ4Q9Y3A0 265 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 LSM5Q9Y4Y9 91 aaKnown RBP0.47□□□□□ -2.33
CLK4-213ENST00000523013 FAM215AQ9Y5M1 114 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 PXMP4Q9Y6I8 212 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ARFGEF3Q5TH69 2177 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 ALPK2Q86TB3 2170 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MAPKBP1O60336 1514 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CEP164Q9UPV0 1460 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CLIP1P30622 1438 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 WRNQ14191 1432 aaPredicted RBP eCLIP0.47□□□□□ -2.33
CLK4-213ENST00000523013 VPS8Q8N3P4 1428 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 CNTLNQ9NXG0 1405 aa0.47□□□□□ -2.33
CLK4-213ENST00000523013 MYH11P35749 1972 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 E9PCH4 1651 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TONSLQ96HA7 1378 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 ABCC12Q96J65 1359 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 DICER1Q9UPY3 1922 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 WDR97A6NE52 1622 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 NESP48681 1621 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SYNJ1O43426 1573 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 PLXNC1O60486 1568 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TIAM1Q13009 1591 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 THOC2Q8NI27 1593 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 UQCRHLA0A096LP55 91 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 A0A1B0GW54 56 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SMIM9A6NGZ8 99 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CLDN24A6NM45 220 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR5K4A6NMS3 321 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR4C45A6NMZ5 311 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR11H12B2RN74 326 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 LST1O00453 97 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 BHLHE40O14503 412 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 COX7A2LO14548 114 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 GSTZ1O43708 216 aaPredicted RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 ATP5HO75947 161 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 HAND1O96004 215 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 IGHV1-69P01742 117 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TTRP02766 147 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 UQCRHP07919 91 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 RPS17P08708 135 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 FAM228BP0C875 321 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CCL5P13501 91 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SLC25A16P16260 332 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 HIST1H1TP22492 207 aaPredicted RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 CRHBPP24387 322 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CD24P25063 80 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 MSNP26038 577 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 ATP6V0CP27449 155 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CAPZBP47756 277 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SULT1A1P50225 295 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 IDH3GP51553 393 aaPredicted RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 CEBPGP53567 150 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 AP2S1P53680 142 aaPredicted RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 TBPL1P62380 186 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 POLR2GP62487 172 aaKnown RBP eCLIP0.46□□□□□ -2.34
CLK4-213ENST00000523013 MRPS15P82914 257 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 SRSF6Q13247 344 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 BATFQ16520 125 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 GUK1Q16774 197 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TMEM31Q5JXX7 168 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 HIST2H3PS2Q5TEC6 136 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 AGTRAPQ6RW13 159 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 Q6ZTI0 123 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SLC51BQ86UW2 128 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TRAPPC5Q8IUR0 188 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 UMODL1-AS1Q8N2C9 162 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SLC35F6Q8N357 371 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 UBL4BQ8N7F7 174 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CLDN22Q8N7P3 220 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR4X2Q8NGF9 303 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR1L8Q8NGR8 309 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR11H2Q8NH07 326 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 OR10A6Q8NH74 314 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CLDND2Q8NHS1 167 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 RAB2BQ8WUD1 216 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SLC35B4Q969S0 331 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 PPP1R14BQ96C90 147 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TMA16Q96EY4 203 aaKnown RBP0.46□□□□□ -2.34
CLK4-213ENST00000523013 PPP1R2P1Q96PQ5 205 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 MGLLQ99685 303 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TMEM222Q9H0R3 208 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CYSTM1Q9H1C7 97 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CXorf21Q9HAI6 301 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 GPR84Q9NQS5 396 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CISHQ9NSE2 258 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 DOK5Q9P104 306 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 TAAR3PQ9P1P4 343 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 AK3Q9UIJ7 227 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 FBXO5Q9UKT4 447 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 ANAPC10Q9UM13 185 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 SNX12Q9UMY4 172 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 ANGPT4Q9Y264 503 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 CUX1P39880 1505 aa0.46□□□□□ -2.34
CLK4-213ENST00000523013 EHBP1L1Q8N3D4 1523 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms