RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 B4DSR2 109 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 JTBO76095 146 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 SAA4P35542 130 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 VDAC2P45880 294 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 LGALS7P47929 136 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 HNF4GQ14541 408 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 RUSC1-AS1Q66K80 236 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 TMEM14EPQ6UXP3 125 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 VSTM2AQ8TAG5 236 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-236ENST00000522792 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 NPFFO15130 113 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 FGF2P09038 288 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 RPL8P62917 257 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 TMED6Q8WW62 240 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 HIPK2Q9H2X6 1198 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 ZNF430Q9H8G1 570 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 HIF1ANQ9NWT6 349 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 TBL2Q9Y4P3 447 aaKnown RBP12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 AUP1Q9Y679 476 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 CD1BP29016 333 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 HES1Q14469 280 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 PSG5Q15238 335 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 C10orf55Q5SWW7 151 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 CCDC144NLQ6NUI1 221 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 OR4A5Q8NH83 315 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 COMMD5Q9GZQ3 224 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 C7orf69Q9H7B7 122 aa12.4□□□□□ -0.42
CTNNA1-236ENST00000522792 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 RPS10-NUDT3A0A1W2PQS6 291 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 FBXO24O75426 580 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 IFNA10P01566 189 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 UBAC2Q8NBM4 344 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 AJUBAQ96IF1 538 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 Q96MF0 132 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 TSNAXQ99598 290 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 PLEKHA3Q9HB20 300 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 ENY2Q9NPA8 101 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 METTL1Q9UBP6 276 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 CACFD1Q9UGQ2 172 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 NBPF19A0A087WUL8 3843 aa12.39□□□□□ -0.43
CTNNA1-236ENST00000522792 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 RAB14P61106 215 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 HABP2Q14520 560 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 MRGPRG-AS1Q2M3A8 158 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 LILRB2Q8N423 598 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 ATP5SQ99766 215 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 REG4Q9BYZ8 158 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 FBXL15Q9H469 300 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 APCP25054 2843 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 OOSP1A8MZH6 123 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 E7EUB6 86 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 CRYGBP07316 175 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 F2RL1P55085 397 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 SLC38A11Q08AI6 406 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 MMDQ15546 238 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 THNSL2Q86YJ6 484 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 KRTAP1-3Q8IUG1 177 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 TEX45Q8NA69 505 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 OR10W1Q8NGF6 305 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 MALSU1Q96EH3 234 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 C1orf159Q96HA4 380 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 SIGLEC9Q9Y336 463 aa12.38□□□□□ -0.43
CTNNA1-236ENST00000522792 GCN1Q92616 2671 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 IGHV1-69DA0A0B4J2H0 117 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 RRHO14718 337 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 MOSP00540 346 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 IGHV1-69P01742 117 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 HBG1P69891 147 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 HBG2P69892 147 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 LOXL1Q08397 574 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 ZNF266Q14584 549 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 GNB1P62873 340 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 PLGLAQ15195 96 aa12.37□□□□□ -0.43
CTNNA1-236ENST00000522792 TNXAQ16473 311 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms