RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 TRAV1-2A0A0B4J238 106 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 TRAV25A0A0B4J276 109 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 CD36P16671 472 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 GPR183P32249 361 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 BMI1P35226 326 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 MAS1LP35410 378 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 RBPMS2Q6ZRY4 209 aaKnown RBP11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 OR2C3Q8N628 320 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 VSTM2AQ8TAG5 236 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
TRAPPC9-213ENST00000522504 TRBV7-1A0A0A6YYK4 115 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 SMIM30A4D0T7 59 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 SSX5O60225 188 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 DEFA4P12838 97 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 HLA-GP17693 338 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 OR2B8PP59922 312 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 HACD4Q5VWC8 232 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 MARC2Q969Z3 335 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 RNF183Q96D59 192 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 HSD17B10Q99714 261 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 CENPOQ9BU64 300 aa11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
TRAPPC9-213ENST00000522504 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 METTL21EPA6NDL7 271 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 PDCD5O14737 125 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 TNFSF12O43508 249 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 SLC22A5O76082 557 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 DHFRP00374 187 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 HIST1H1BP16401 226 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 GALP22466 123 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 RANBP1P43487 201 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 APOC4P55056 127 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 ZNF436Q9C0F3 470 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 C5orf66Q9H5L9 145 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 DNAH17Q9UFH2 4485 aa11.29□□□□□ -0.6
TRAPPC9-213ENST00000522504 DYNC1H1Q14204 4646 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 TMEM235A6NFC5 223 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 CTXN2P0C2S0 81 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 PTHLHP12272 177 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 RPA2P15927 270 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 ATF4P18848 351 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 RAB3BP20337 219 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 TIMM50Q3ZCQ8 353 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 CNIH2Q6PI25 160 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 PHLDA1Q8WV24 401 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 CXorf58Q96LI9 332 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 DCSTAMPQ9H295 470 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 KLK5Q9Y337 293 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 UFC1Q9Y3C8 167 aa11.28□□□□□ -0.6
TRAPPC9-213ENST00000522504 UBE2CO00762 179 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 TSPAN4O14817 238 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 HRASP01112 189 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 FCGR2BP31994 310 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 ELLP55199 621 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 PLET1Q6UQ28 207 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 ZNF66Q6ZN08 573 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 SLC38A6Q8IZM9 456 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 TSPAN14Q8NG11 270 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 TMEM190Q8WZ59 177 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 CCL28Q9NRJ3 127 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 ANXA10Q9UJ72 324 aa11.27□□□□□ -0.61
TRAPPC9-213ENST00000522504 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 KIR2DL5BA0A0G2JN68 375 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 KIR2DL5BA0A0G2JPC4 375 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 TGOLN2O43493 480 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 PTBP1P26599 531 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■■■■ 37.3
TRAPPC9-213ENST00000522504 ZNF124Q15973 351 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 SPARTQ8N0X7 666 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 KIR2DL5AQ8N109 375 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 STPG3Q8N7X2 389 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 ZNF414Q96IQ9 312 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 HRASLSQ9HDD0 168 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 NDUFB11Q9NX14 153 aa11.26□□□□□ -0.61
TRAPPC9-213ENST00000522504 A0A087WXM4 84 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 TRDV1A0A1B0GX56 115 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 OR2T8A6NH00 312 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 SULT1C2O00338 296 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 UPK2O00526 184 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 MYL9P24844 172 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 MFAP2P55001 183 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 PRR20EP86478 221 aa11.25□□□□□ -0.61
TRAPPC9-213ENST00000522504 PRR20CP86479 221 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms