RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 SIGLEC8Q9NYZ4 499 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 ABCA13Q86UQ4 5058 aa8.06□□□□□ -1.12
PDGFRB-203ENST00000517660 BMPR1BO00238 502 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 SULT1C2O00338 296 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 OR2J3O76001 311 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 DHFRP00374 187 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 HPRT1P00492 218 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 CRYGCP07315 174 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 FRMD6-AS1P0C7T7 363 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 NQO2P16083 231 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 HLA-GP17693 338 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 NAT1P18440 290 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 PSMB6P28072 239 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 GNRHRP30968 328 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 PRSS3P35030 304 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 TAS2R31P59538 309 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 HERV-K104P61576 105 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 KLK9Q2XQG4 91 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 ZNF818PQ6ZRF7 136 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 Q8N1Y9 231 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 SLC25A46Q96AG3 418 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 FUNDC2Q9BWH2 189 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 HRASLSQ9HDD0 168 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 EHFQ9NZC4 300 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 PEMTQ9UBM1 199 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 FBXL7Q9UJT9 491 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 ADAM30Q9UKF2 790 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 KLK9Q9UKQ9 250 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 ANAPC10Q9UM13 185 aa8.05□□□□□ -1.12
PDGFRB-203ENST00000517660 A0A1B0GW64 132 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 E7EUB6 86 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 UPK2O00526 184 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 PMP2P02689 132 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 HIST1H1BP16401 226 aaKnown RBP8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 RFX2P48378 723 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 MECP2P51608 486 aaKnown RBP8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 TAS2R46P59540 309 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 POU2AF1Q16633 256 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 AADACL3Q5VUY0 350 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 OR4A47Q6IF82 309 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 TMEM17Q86X19 198 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 SGPP2Q8IWX5 399 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 OR5H2Q8NGV7 314 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 CMTM3Q96MX0 182 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 ZNF2Q9BSG1 426 aaPredicted RBP8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 PLEKHA2Q9HB19 425 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 COMMD3Q9UBI1 195 aa8.04□□□□□ -1.12
PDGFRB-203ENST00000517660 A8MZ25 164 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 GGCTO75223 188 aaKnown RBP8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 PGLYRP1O75594 196 aaPredicted RBP8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 GABARAPO95166 117 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 NDUFB8O95169 186 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 APOA1P02647 267 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 MYOD1P15172 320 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 AREGP15514 252 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 CTRB1P17538 263 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 OR2B8PP59922 312 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 NCS1P62166 190 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 CTRB2Q6GPI1 263 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 LCN12Q6JVE5 192 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 LYSMD2Q8IV50 215 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 Q8N402 240 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 OR2K2Q8NGT1 345 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 OR6F1Q8NGZ6 308 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 OR51H1Q8NH63 302 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 MOB3AQ96BX8 217 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 C19orf73Q9NVV2 129 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 DMRT1Q9Y5R6 373 aa8.03□□□□□ -1.12
PDGFRB-203ENST00000517660 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 CGB1A6NKQ9 187 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 S1PR2O95136 353 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 OR2C1O95371 312 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 EIF4EP06730 217 aaKnown RBP8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 FGF2P09038 288 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 DEFA4P12838 97 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 F2RP25116 425 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 HLA-DMAP28067 261 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 RORCP51449 518 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 VBP1P61758 197 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 SPCS2Q15005 226 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 GPHB5Q86YW7 130 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 CMTM1Q8IZ96 169 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 DMBX1Q8NFW5 382 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 GPX8Q8TED1 209 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 EEF1AKMT3Q96AZ1 226 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 RCHY1Q96PM5 261 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 SRSF8Q9BRL6 282 aaKnown RBP8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 COMMD5Q9GZQ3 224 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 SCPEP1Q9HB40 452 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 PALMDQ9NP74 551 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 TMEM140Q9NV12 185 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 COMMD9Q9P000 198 aa8.02□□□□□ -1.13
PDGFRB-203ENST00000517660 IGLV11-55A0A075B6I3 123 aa8.01□□□□□ -1.13
PDGFRB-203ENST00000517660 PPP5D1E7EU14 171 aa8.01□□□□□ -1.13
PDGFRB-203ENST00000517660 LGALS9O00182 355 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms