RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 P0DMU3 169 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM225BP0DP42 221 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 PSG2P11465 335 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TPT1P13693 172 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RPS2P15880 293 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 AMY2BP19961 511 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 GZMHP20718 246 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 CD34P28906 385 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 PRSS3P35030 304 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SOX2P48431 317 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SULT1A2P50226 295 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 PPT1P50897 306 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TAS2R19P59542 299 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB5BP61020 215 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SSTP61278 116 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RPL23AP62750 156 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 FABP9Q0Z7S8 132 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RBM39Q14498 530 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 IL13RA2Q14627 380 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ATXN7L3Q14CW9 347 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ARL6IP1Q15041 203 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RSU1Q15404 277 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB11BQ15907 218 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ODF4Q2M2E3 257 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 MPV17LQ2QL34 196 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM30BQ3MIR4 351 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 MOGAT2Q3SYC2 334 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 Q3ZCU0 254 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 C4orf46Q504U0 113 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 C9orf152Q5JTZ5 239 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR52W1Q6IF63 320 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB12Q6IQ22 244 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 DHRS11Q6UWP2 260 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF826PQ6ZT77 177 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SPAG16Q8N0X2 631 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OSR2Q8N2R0 312 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF565Q8N9K5 539 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 ADAD2Q8NCV1 583 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR10A7Q8NGE5 316 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR52N4Q8NGI2 321 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR51A2Q8NGJ7 313 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR13C9Q8NGT0 318 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 KCNG3Q8TAE7 436 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 CCDC107Q8WV48 283 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TMED6Q8WW62 240 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 CORO2AQ92828 525 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM230Q96A57 120 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM3DQ96BQ1 224 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SAT2Q96F10 170 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 CYYR1Q96J86 154 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SNX22Q96L94 193 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 AQP10Q96PS8 301 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 S100A13Q99584 98 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC25A21Q9BQT8 299 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 GGACTQ9BVM4 153 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 NMES1Q9C002 83 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SELENOIQ9C0D9 397 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC5A7Q9GZV3 580 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 RIMS4Q9H426 269 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 METTL8Q9H825 291 aaKnown RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 LINC00574Q9H8X3 128 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SIRT7Q9NRC8 400 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SMCO4Q9NRQ5 59 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 DCAF16Q9NXF7 216 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 TAS2R8Q9NYW2 309 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 OR5AC2Q9NZP5 309 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC25A10Q9UBX3 287 aaPredicted RBP2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 FBXL17Q9UF56 701 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 SHPKQ9UHJ6 478 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 KPTNQ9Y664 436 aa2.38□□□□□ -2.03
SCARNA13-201ENST00000516672 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A0A6YYD4 124 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A0A6YYH2 397 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 IGKV1-12A0A0C4DH73 117 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1B0GV90 55 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1B0GW64 132 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 hADV38S2A0JD32 116 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C7orf77A4D0Y5 90 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM235A6NFC5 223 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 A6NJ64 397 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C17orf98A8MV24 154 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C1orf196B1AJZ1 125 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C22orf46C9J442 243 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB27BO00194 218 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PHOX2AO14813 284 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 DEGS1O15121 323 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC31A2O15432 143 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TXNL1O43396 289 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SCGNO76038 276 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 NDUFB8O95169 186 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HAND1O96004 215 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 IGKV1D-12P01611 117 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HLA-AP01891 365 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GYPAP02724 150 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms