RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 Q6ZS49 121 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 GCNT2Q8N0V5 402 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 OBP2BQ9NPH6 170 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 GNG12Q9UBI6 72 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 OR5B21A6NL26 309 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 CA1P00915 261 aaPredicted RBP8.06□□□□□ -1.12
VCAN-210ENST00000513960 RPL30P62888 115 aaKnown RBP8.06□□□□□ -1.12
VCAN-210ENST00000513960 HOXA4Q00056 320 aaPredicted RBP8.06□□□□□ -1.12
VCAN-210ENST00000513960 AESQ08117 197 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
VCAN-210ENST00000513960 FGF23Q9GZV9 251 aaPredicted RBP8.06□□□□□ -1.12
VCAN-210ENST00000513960 HYPMO75409 117 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 OR10J4P0C629 311 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 USF1P22415 310 aaPredicted RBP8.06□□□□□ -1.12
VCAN-210ENST00000513960 CRYBB3P26998 211 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 ERVK-16P61578 105 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 FOXL1Q12952 345 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 PSG5Q15238 335 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 ABHD12Q8N2K0 398 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
VCAN-210ENST00000513960 CLDN14O95500 239 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 SP9P0CG40 484 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 ARG2P78540 354 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 SPATA31B1PQ5VZV4 182 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 C1orf174Q8IYL3 243 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 A0A1W2PNU3 283 aaPredicted RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 CRYABP02511 175 aaKnown RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 C3orf79P0CE67 100 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 CD59P13987 128 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 CD99P14209 185 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 TCTAP57738 103 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 MRPL49Q13405 166 aaKnown RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 LDLRAD2Q5SZI1 272 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 OR4A47Q6IF82 309 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 LINC00596Q86U02 117 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 FAM216AQ8WUB2 273 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 RCHY1Q96PM5 261 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 GTF3C1Q12789 2109 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 TRBV20OR9-2A0A075B6H5 130 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 CXorf1O96002 111 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 APOA2P02652 100 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 KLF3P57682 345 aaPredicted RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 RAB31Q13636 194 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 DAZAP2Q15038 168 aaPredicted RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 FBLN7Q53RD9 439 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 FBXW9Q5XUX1 488 aa8.05□□□□□ -1.12
VCAN-210ENST00000513960 RP1L1Q8IWN7 2480 aaPredicted RBP8.05□□□□□ -1.12
VCAN-210ENST00000513960 TRGV5A0A0B4J1U4 118 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 HELTA6NFD8 242 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 CGAP01215 116 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 GPX1P07203 203 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 TBC1D28Q2M2D7 210 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 CENPWQ5EE01 88 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 Q5PR19 223 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 HSD17B10Q99714 261 aaKnown RBP8.04□□□□□ -1.12
VCAN-210ENST00000513960 ICE1Q9Y2F5 2266 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 MED13Q9UHV7 2174 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 WNT2P09544 360 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 GPR6P46095 362 aaPredicted RBP8.04□□□□□ -1.12
VCAN-210ENST00000513960 MDP1Q86V88 176 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 TECRQ9NZ01 308 aaKnown RBP8.04□□□□□ -1.12
VCAN-210ENST00000513960 TP53TG3Q9ULZ0 132 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 YTHDF2Q9Y5A9 579 aaKnown RBP8.04□□□□□ -1.12
VCAN-210ENST00000513960 M0R296 226 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 APCSP02743 223 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 SP5Q6BEB4 398 aaPredicted RBP8.04□□□□□ -1.12
VCAN-210ENST00000513960 ZNF826PQ6ZT77 177 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 RTL8AQ9BWD3 113 aa8.04□□□□□ -1.12
VCAN-210ENST00000513960 HSBP1L1C9JCN9 74 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 M0R1X1 148 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 IGLC3P0DOY3 106 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TNFSF4P23510 183 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 GPR12P47775 334 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TMEM178AQ8NBL3 297 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 KCNS1Q96KK3 526 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 AP1S3Q96PC3 154 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 GAL3ST2Q9H3Q3 398 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 MS4A5Q9H3V2 200 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TP73-AS1Q9UF72 201 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 PCSK5Q92824 1860 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 FAM90A26D6RGX4 464 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 RRHO14718 337 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 RAB29O14966 203 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 MLNRO43193 412 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 FOXH1O75593 365 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SELENOTP62341 195 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 ZNF766Q5HY98 468 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TRAT1Q6PIZ9 186 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 SGK494Q96LW2 274 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 HSPB7Q9UBY9 170 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 J3QT63 122 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 ZNF324O75467 553 aaPredicted RBP8.03□□□□□ -1.12
VCAN-210ENST00000513960 GCHFRP30047 84 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 MFAP2P55001 183 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 UBE2V1Q13404 147 aa8.03□□□□□ -1.12
VCAN-210ENST00000513960 ACSF3Q4G176 576 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms