RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 RCC1LQ96I51 464 aaKnown RBP5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 PDCD10Q9BUL8 212 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 ZNF430Q9H8G1 570 aaPredicted RBP5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 GAR1Q9NY12 217 aaKnown RBP5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 TNFSF12O43508 249 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 TRAPPC2P0DI81 140 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 TRAPPC2BP0DI82 140 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 PPP5CP53041 499 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 TMEM95Q3KNT9 176 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 OR4A16Q8NH70 328 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 RNASE11Q8TAA1 199 aaKnown RBP5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 GRPEL2Q8TAA5 225 aa5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 LSM10Q969L4 123 aaKnown RBP5.6□□□□□ -1.51
RAPGEF2-212ENST00000513816 SCGB2A1O75556 95 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ATP5IP56385 69 aaPredicted RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 RAB25P57735 213 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 KRTAP10-3P60369 221 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 GNB1P62873 340 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ZNF79Q15937 498 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 MZT2BQ6NZ67 158 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 OR51S1Q8NGJ8 323 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 MARCH1Q8TCQ1 289 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 RITA1Q96K30 269 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 CLCC1Q96S66 551 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 QTRT1Q9BXR0 403 aaKnown RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 CRYM-AS1A6NIL9 109 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 SRRM4A7MD48 611 aaKnown RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 S1PR2O95136 353 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 LGALS1P09382 135 aaKnown RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ZP3P21754 424 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 RAB9AP51151 201 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 AKR1C2P52895 323 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ODF1Q14990 250 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 TATDN3Q17R31 274 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 TRIM16LQ309B1 348 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 OR2B11Q5JQS5 317 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ZNF429Q86V71 674 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 LGI3Q8N145 548 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 ZNF491Q8N8L2 437 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 NOL4LQ96MY1 436 aaPredicted RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 FYTTD1Q96QD9 318 aaKnown RBP5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 TMEM222Q9H0R3 208 aa5.59□□□□□ -1.51
RAPGEF2-212ENST00000513816 SH2D7A6NKC9 451 aaPredicted RBP5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 INS-IGF2F8WCM5 200 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 CRYGCP07315 174 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 NSUN5P1Q3KNT7 163 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 TMEM128Q5BJH2 165 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 NECAP1Q8NC96 275 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 KLHL30-AS1Q8NEE0 82 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 LFNGQ8NES3 379 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 WFDC9Q8NEX5 89 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 RBPMSQ93062 196 aaKnown RBP5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 WSB1Q9Y6I7 421 aa5.59□□□□□ -1.52
RAPGEF2-212ENST00000513816 MXRA5Q9NR99 2828 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 FCN1O00602 326 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 TRGV3P03979 118 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 INSL3P51460 131 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 SUB1P53999 127 aaKnown RBP eCLIP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 OR52E5Q8NH55 327 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CHAC2Q8WUX2 184 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CXorf58Q96LI9 332 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 MSGN1A6NI15 193 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CORTO00230 105 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CDS2O95674 445 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ERHP84090 104 aaKnown RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 NDPQ00604 133 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ZNF585BQ52M93 769 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CENPSQ8N2Z9 138 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 RANGRFQ9HD47 186 aaPredicted RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ENY2Q9NPA8 101 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 AKIP1Q9NQ31 210 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 COA4Q9NYJ1 87 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 TMEM56-RWDD3S4R434 201 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 COL6A5A8TX70 2615 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 HSPB1P04792 205 aaKnown RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 EGR2P11161 476 aaPredicted RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 SLC25A6P12236 298 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 IL7P13232 177 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 CD33P20138 364 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 PSMB6P28072 239 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 TPPP2P59282 170 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 DEFA1P59665 94 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 DEFA3P59666 94 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 HSPE1P61604 102 aaKnown RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ZNF329Q86UD4 541 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ADAD2Q8NCV1 583 aaKnown RBP5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 SEC22AQ96IW7 307 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 ZNF355PQ9NSJ1 428 aa5.58□□□□□ -1.52
RAPGEF2-212ENST00000513816 A0A0B4J2A0 478 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 A6NJY4 79 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 ADARB2-AS1A8MUL3 147 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 RAMP3O60896 148 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 KRASP01116 189 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 BRWD1-AS2P59051 145 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 ATP5G2Q06055 141 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 ZNF616Q08AN1 781 aa5.57□□□□□ -1.52
RAPGEF2-212ENST00000513816 REC114Q7Z4M0 266 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms