RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 C10orf99Q6UWK7 81 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 CENPSQ8N2Z9 138 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 DMBX1Q8NFW5 382 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 OR4X2Q8NGF9 303 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 OR5M8Q8NGP6 311 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 FOXA2Q9Y261 457 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-218ENST00000513506 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 MSGN1A6NI15 193 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 ACTL6BO94805 426 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 CNIH1O95406 144 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 OPN1MWP04001 364 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 OR2B8PP59922 312 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 SRPXP78539 464 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 SELENOHQ8IZQ5 122 aaKnown RBP12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 DUSP18Q8NEJ0 188 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 FKBP11Q9NYL4 201 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
POLR2J3-218ENST00000513506 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 A0A0B4J293 547 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 LINC00854A0A1B0GVQ3 168 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 E7EUB6 86 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 TCRBP04435 133 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 CRYGCP07315 174 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 OR9G9P0C7N8 305 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 ANXA3P12429 323 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 AKR1C4P17516 323 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 RPL27AP46776 148 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 TNXAQ16473 311 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 HSD17B13Q7Z5P4 300 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 TSSC4Q9Y5U2 329 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-218ENST00000513506 TEX50A0A1B0GTY4 177 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 C15orf61A6NNL5 157 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 INS-IGF2F8WCM5 200 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 SFT2D2O95562 160 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 PPP1R1AQ13522 171 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 PDLIM3Q53GG5 364 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 C10orf55Q5SWW7 151 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 UNQ5815/PRO19632Q6UWF5 114 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 TMED4Q7Z7H5 227 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 OR1L8Q8NGR8 309 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 QTRT1Q9BXR0 403 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 SLA2Q9H6Q3 261 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
POLR2J3-218ENST00000513506 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 SNAPC5O75971 98 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 RAB9AP51151 201 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 RPL23AP62750 156 aaKnown RBP12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 GNB1P62873 340 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 RUNX1Q01196 453 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 NMSQ5H8A3 153 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 CXorf66Q5JRM2 361 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 LGI3Q8N145 548 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 UBE2E2Q96LR5 201 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 COMMD5Q9GZQ3 224 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 CACFD1Q9UGQ2 172 aa12.11□□□□□ -0.47
POLR2J3-218ENST00000513506 TRBV9A0A0B4J1U6 114 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 A0A0G2JRQ6 117 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 FAM240BA0A1B0GVZ2 78 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 DUS4LO95620 317 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 OR4E1P0C645 316 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 CTRB1P17538 263 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 ECSCRQ19T08 205 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 ANKRD55Q3KP44 614 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 PRR31Q5SQ13 230 aa12.1□□□□□ -0.47
POLR2J3-218ENST00000513506 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms