RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 HBE1P02100 147 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 ATP5G1P05496 136 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 ATP5G3P48201 142 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
CLCN3-208ENST00000512813 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-208ENST00000512813 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 GID4Q8IVV7 300 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 TLCD1Q96CP7 247 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 RAB40CQ96S21 281 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 TAS2R4Q9NYW5 299 aa6.32□□□□□ -1.4
CLCN3-208ENST00000512813 TRAV3A0A0B4J244 114 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 KBTBD11O94819 623 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 NAPSAO96009 420 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 RPSAP08865 295 aaKnown RBP6.31□□□□□ -1.4
CLCN3-208ENST00000512813 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 Q96M66 194 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 IL4I1Q96RQ9 567 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 UQCC2Q9BRT2 126 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 OR2D2Q9H210 308 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 OR51E2Q9H255 320 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 C21orf62Q9NYP8 219 aa6.31□□□□□ -1.4
CLCN3-208ENST00000512813 WARS2Q9UGM6 360 aaKnown RBP6.31□□□□□ -1.4
CLCN3-208ENST00000512813 CGB1A6NKQ9 187 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 H3BMM0 161 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 M0R129 80 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 SIVA1O15304 175 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 YIF1AO95070 293 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 APOHP02749 345 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-208ENST00000512813 CTSGP08311 255 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 MGMTP16455 207 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 PSME3P61289 254 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 HLA-DRB3P79483 266 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 EFNB1P98172 346 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 ARFRP1Q13795 201 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 OR10K2Q6IF99 312 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 CGB2Q6NT52 195 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 TMEM167AQ8TBQ9 72 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 DCANP1Q8TF63 244 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 GGHQ92820 318 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 DAZAP1Q96EP5 407 aaKnown RBP6.3□□□□□ -1.4
CLCN3-208ENST00000512813 ADTRPQ96IZ2 230 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 PRRG3Q9BZD7 231 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 SELENOIQ9C0D9 397 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 EFCAB1Q9HAE3 211 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 TMEM138Q9NPI0 162 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 RDH8Q9NYR8 311 aa6.3□□□□□ -1.4
CLCN3-208ENST00000512813 IGLC7A0M8Q6 106 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 NPIPB6E9PJ23 425 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 DEFB130BP0DP73 79 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 DEFB130AP0DP74 79 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 COX4I1P13073 169 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 HSD17B1P14061 328 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 DUTP33316 252 aaKnown RBP6.29□□□□□ -1.4
CLCN3-208ENST00000512813 PSMG4Q5JS54 123 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 UBAC2Q8NBM4 344 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 OR6M1Q8NGM8 313 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 VSTM2AQ8TAG5 236 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 RXFP4Q8TDU9 374 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 GNPNAT1Q96EK6 184 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-208ENST00000512813 GINS3Q9BRX5 216 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 BANF2Q9H503 90 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 ZNF556Q9HAH1 456 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 GHRLQ9UBU3 117 aa6.29□□□□□ -1.4
CLCN3-208ENST00000512813 LPAP08519 4548 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 SLC16A6O15403 523 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 CYB5BO43169 146 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 ANXA8P13928 327 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 PPP3R1P63098 170 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 Q56UQ5 140 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 VKORC1L1Q8N0U8 176 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 PUSL1Q8N0Z8 303 aaKnown RBP6.28□□□□□ -1.4
CLCN3-208ENST00000512813 SETD6Q8TBK2 473 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 ZNF184Q99676 751 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-208ENST00000512813 TMEM231Q9H6L2 316 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 CHMP1AQ9HD42 196 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-208ENST00000512813 GOLT1BQ9Y3E0 138 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
CLCN3-208ENST00000512813 TRBV6-6A0A0A6YYG2 114 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 IGHV3-66A0A0C4DH42 116 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 IGKV1-6A0A0C4DH72 117 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 CBY3A6NI87 242 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 TMEM212A6NML5 194 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 DBX1A6NMT0 343 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 EDF1O60869 148 aaKnown RBP6.27□□□□□ -1.41
CLCN3-208ENST00000512813 BDKRB2P30411 391 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-208ENST00000512813 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
CLCN3-208ENST00000512813 RPL8P62917 257 aaKnown RBP6.27□□□□□ -1.41
CLCN3-208ENST00000512813 GLIPR1L1Q6UWM5 242 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 Q6ZRU5 148 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 Q8N814 137 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 GDPD1Q8N9F7 314 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 FCGR1BQ92637 280 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 FAAP24Q9BTP7 215 aa6.27□□□□□ -1.41
CLCN3-208ENST00000512813 MAGIXQ9H6Y5 334 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms