RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 I3L521 148 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 COX7A2LO14548 114 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LEPROTO15243 131 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SGCEO43556 437 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 UGT2B11O75310 529 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 HYPMO75409 117 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 NSA2O95478 260 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 OTCP00480 354 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ATP5G1P05496 136 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 TPM2P07951 284 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 METTL15P1P0C7V9 234 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LINC00614P0C842 121 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SULT1A3P0DMM9 295 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SULT1A4P0DMN0 295 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 HIST1H1CP16403 213 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 CXCL2P19875 107 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 HLA-DMBP28068 263 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 CSN1S1P47710 185 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 RAB13P51153 203 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 H2BFSP57053 126 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 FABP5Q01469 135 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SRSF6Q13247 344 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 CIRBPQ14011 172 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 EXOC3L4Q17RC7 722 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM249Q2WGJ8 235 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 GDF5OSQ5U4N7 250 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 LCA10Q71F78 164 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM251Q8N6I4 163 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ATP6V1C2Q8NEY4 427 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 BCL7BQ9BQE9 202 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 METTL9Q9H1A3 318 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 NCOR1P1Q9H4R4 102 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ACER3Q9NUN7 267 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 PLAC8Q9NZF1 115 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 RABL2AQ9UBK7 228 aaPredicted RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 MRM2Q9UI43 246 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ALPK3Q96L96 1907 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 TENM2Q9NT68 2774 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ABCA2Q9BZC7 2435 aa-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SETD2Q9BYW2 2564 aaPredicted RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 ZNF106Q9H2Y7 1883 aaKnown RBP-0.07□□□□□ -2.42
PDGFC-208ENST00000512711 SCN3AQ9NY46 2000 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 PTPN13Q12923 2485 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 TEP1Q99973 2627 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 UBR5O95071 2799 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SMARCA4P51532 1647 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 FAT2Q9NYQ8 4349 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 GGT3PA6NGU5 568 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 C19orf84I3L1E1 186 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 AZIN1O14977 448 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 FADS1O60427 444 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR5F1O95221 314 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 ATP6V1G2O95670 118 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 DNAL4O96015 105 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CST4P01036 141 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 MSMBP08118 114 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CCL5P13501 91 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 ZNF25P17030 456 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CXCL3P19876 107 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SYT1P21579 422 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 KDELR1P24390 212 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 S100A7P31151 101 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 NUP62P37198 522 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 FXYD2P54710 66 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SPINK7P58062 85 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SNAP25P60880 206 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 FKBP1AP62942 108 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 HLA-DRB3P79483 266 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 STX3Q13277 289 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 JOSD1Q15040 202 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR4D1Q15615 310 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 C18orf21Q32NC0 220 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 DNAL1Q4LDG9 190 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 LCN15Q6UWW0 184 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SSX8Q7RTT4 187 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 GKN2Q86XP6 184 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR1M1Q8NGA1 313 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR11H6Q8NGC7 330 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR10D3Q8NH80 312 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 RNASEH2CQ8TDP1 164 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CIDECQ96AQ7 238 aaPredicted RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 PPCDCQ96CD2 204 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OPTNQ96CV9 577 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SERPINB11Q96P15 392 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 SLC50A1Q9BRV3 221 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM70Q9BUB7 260 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 TIPINQ9BVW5 301 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 OR8D2Q9GZM6 311 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 NSRP1Q9H0G5 558 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CXorf21Q9HAI6 301 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 HRASLSQ9HDD0 168 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 PRELID1Q9Y255 219 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 TPRP12270 2363 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM94Q12767 1356 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 KCPQ6ZWJ8 1503 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 THSD7AQ9UPZ6 1657 aa-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CHD8Q9HCK8 2581 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms