RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 DGAT2L6Q6ZPD8 337 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 C20orf196Q8IYI0 205 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 SAXO1Q8IYX7 474 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 TMEM61Q8N0U2 210 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 DEFB125Q8N687 156 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ZFP41Q8N8Y5 198 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 OR5A1Q8NGJ0 315 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ZNF420Q8TAQ5 688 aaPredicted RBP2.6□□□□□ -1.99
NUP54-209ENST00000510569 THEM6Q8WUY1 208 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ROPN1LQ96C74 230 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 GPR146Q96CH1 333 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 REEP6Q96HR9 211 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 SLIRPQ9GZT3 109 aaKnown RBP2.6□□□□□ -1.99
NUP54-209ENST00000510569 C20orf85Q9H1P6 137 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 IFI27L2Q9H2X8 130 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 HES4Q9HCC6 221 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 NIT2Q9NQR4 276 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 C14orf105Q9NVL8 296 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 DNAJC12Q9UKB3 198 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 PKIGQ9Y2B9 76 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 ORC6Q9Y5N6 252 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 RFNGQ9Y644 331 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 DOCK1Q14185 1865 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 PLXNA1Q9UIW2 1896 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 VWA8A3KMH1 1905 aa2.6□□□□□ -1.99
NUP54-209ENST00000510569 PDCD11Q14690 1871 aaKnown RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 RALGAPA2Q2PPJ7 1873 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 IGHV1OR15-1A0A075B7D0 117 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 MEIKINA0A087WXM9 373 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 TRAV8-6A0A0B4J262 113 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 A0A0G2JRQ6 117 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 FAM236DA0A1B0GTK5 79 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 C12orf77C9JDV5 145 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 UPK2O00526 184 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 CDS2O95674 445 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 EPPINO95925 133 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 ATP5G1P05496 136 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 CRYBA1P05813 215 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 EIF4EP06730 217 aaKnown RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 C8GP07360 202 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 FAM236CP0DP71 79 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 SRIP30626 198 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 APLNRP35414 380 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 GGT2P36268 569 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 EVX1P49640 407 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 RPS24P62847 133 aaKnown RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 TNFAIP6P98066 277 aaPredicted RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 CAV1Q03135 178 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 PRDX4Q13162 271 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 IL15RAQ13261 267 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 PAFAH1B3Q15102 231 aaKnown RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 TMEM69Q5SWH9 247 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 SPATA31B1PQ5VZV4 182 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 DNM1P46Q6ZS02 220 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 DEFB128Q7Z7B8 93 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 LINC01551Q86U37 167 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 BAP18Q8IXM2 172 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 C6orf223Q8N319 242 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 FAM71E2Q8N5Q1 922 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 ZNF615Q8N8J6 731 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 GDPD1Q8N9F7 314 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 OR2A12Q8NGT7 310 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 OR10J6PQ8NGY7 276 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 OR4C6Q8NH72 309 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 C10orf82Q8WW14 230 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 DEDD2Q8WXF8 326 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 ACOT12Q8WYK0 555 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 ARL11Q969Q4 196 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 PLEKHB2Q96CS7 222 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 GALNT14Q96FL9 552 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 RNF185Q96GF1 192 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 GPR82Q96P67 336 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 RNF126Q9BV68 326 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 CHST6Q9GZX3 395 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 CDC42EP4Q9H3Q1 356 aaKnown RBP2.59□□□□□ -1.99
NUP54-209ENST00000510569 GPR84Q9NQS5 396 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 XCL2Q9UBD3 114 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 BTRCQ9Y297 605 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 U3KQ87 197 aa2.59□□□□□ -1.99
NUP54-209ENST00000510569 CASP8AP2Q9UKL3 1982 aa2.59□□□□□ -2
NUP54-209ENST00000510569 TANC1Q9C0D5 1861 aa2.58□□□□□ -2
NUP54-209ENST00000510569 IGLV4-69A0A075B6H9 119 aa2.58□□□□□ -2
NUP54-209ENST00000510569 A0A087WUU8 490 aa2.58□□□□□ -2
NUP54-209ENST00000510569 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
NUP54-209ENST00000510569 A0A0J9YY10 115 aa2.58□□□□□ -2
NUP54-209ENST00000510569 A0A0X1KG70 313 aa2.58□□□□□ -2
NUP54-209ENST00000510569 A0A1B0GX78 115 aa2.58□□□□□ -2
NUP54-209ENST00000510569 C5orf49A4QMS7 147 aa2.58□□□□□ -2
NUP54-209ENST00000510569 RBMY1BA6NDE4 496 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 PGPA6NDG6 321 aa2.58□□□□□ -2
NUP54-209ENST00000510569 RBMY1EA6NEQ0 496 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 C8orf87E5RJ46 101 aa2.58□□□□□ -2
NUP54-209ENST00000510569 K7EPK0 472 aa2.58□□□□□ -2
NUP54-209ENST00000510569 AIPO00170 330 aa2.58□□□□□ -2
NUP54-209ENST00000510569 XKRYO14609 159 aa2.58□□□□□ -2
NUP54-209ENST00000510569 NDUFS5O43920 106 aa2.58□□□□□ -2
NUP54-209ENST00000510569 EDF1O60869 148 aaKnown RBP2.58□□□□□ -2
NUP54-209ENST00000510569 SPAG7O75391 227 aa2.58□□□□□ -2
NUP54-209ENST00000510569 PIAS1O75925 651 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms