RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 TEX45Q8NA69 505 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 OR11H6Q8NGC7 330 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 RPEQ96AT9 228 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 RCC1LQ96I51 464 aaKnown RBP6.37□□□□□ -1.39
SSBP2-213ENST00000509743 RNF5Q99942 180 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 HINT2Q9BX68 163 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 ACTR3CQ9C0K3 210 aaPredicted RBP6.37□□□□□ -1.39
SSBP2-213ENST00000509743 MAP1LC3BQ9GZQ8 125 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 SLC39A9Q9NUM3 307 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 INSIG2Q9Y5U4 225 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 ATMQ13315 3056 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 GTF3C1Q12789 2109 aa6.37□□□□□ -1.39
SSBP2-213ENST00000509743 DSPP15924 2871 aaKnown RBP6.36□□□□□ -1.39
SSBP2-213ENST00000509743 NCOR2Q9Y618 2525 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 SPTBN2O15020 2390 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 IGHV1-3A0A0C4DH29 117 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 CTXND1A0A1B0GTU2 59 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 SMCO3A2RU48 225 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 CYB5BO43169 146 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 NDUFS6O75380 124 aaKnown RBP6.36□□□□□ -1.39
SSBP2-213ENST00000509743 LY6HO94772 140 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 IGLV2-23P01705 113 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 PRTN3P24158 256 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 COX7A1P24310 79 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 CDKN1AP38936 164 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 OPRK1P41145 380 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-213ENST00000509743 ERHP84090 104 aaKnown RBP6.36□□□□□ -1.39
SSBP2-213ENST00000509743 BTN1A1Q13410 526 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 RAB31Q13636 194 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 GUCA2BQ16661 112 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 BSXQ3C1V8 233 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 FFAR4Q5NUL3 377 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 ACSM6Q6P461 480 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 TREML4Q6UXN2 200 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 PNKDQ8N490 385 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 OR4P4Q8NGL7 312 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 OR10G4Q8NGN3 311 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 OR10G9Q8NGN4 311 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 OR10G7Q8NGN6 311 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 CLDND2Q8NHS1 167 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 NPVFQ9HCQ7 196 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 NDUFA4L2Q9NRX3 87 aa6.36□□□□□ -1.39
SSBP2-213ENST00000509743 KLF2Q9Y5W3 355 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-213ENST00000509743 CHD3Q12873 2000 aaKnown RBP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 LOC102723971A0A1B0GUV8 181 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 A0A1B0GV50 99 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 OOSP1A8MZH6 123 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 SEC14L6B5MCN3 397 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 C9JQL5 133 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 LY6LH3BQJ8 138 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 OVOL3O00110 214 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 TSPAN9O75954 239 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 IGHV2-5P01817 119 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 BCL2P10415 239 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 HTR1DP28221 377 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 SUB1P53999 127 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 CCL20P78556 96 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 ICAM4Q14773 271 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 ZNF726P1Q15940 193 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 TMEM249Q2WGJ8 235 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 TPTE2P1Q5T6R2 138 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 TEPPQ6URK8 271 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 ATRAIDQ6UW56 229 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 LCN15Q6UWW0 184 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 RBMS3Q6XE24 437 aaKnown RBP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 MOB3BQ86TA1 216 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 MMD2Q8IY49 270 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 RPP25LQ8N5L8 163 aaKnown RBP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 Q8N7P7 452 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 TMEM170AQ8WVE7 144 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 CACNG8Q8WXS5 425 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 P2RX4Q99571 388 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 SPOCK3Q9BQ16 436 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 VSIRQ9H7M9 311 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 MANBALQ9NQG1 85 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 DPM3Q9P2X0 92 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 LSM4Q9Y4Z0 139 aaKnown RBP6.35□□□□□ -1.39
SSBP2-213ENST00000509743 DCHS1Q96JQ0 3298 aa6.35□□□□□ -1.39
SSBP2-213ENST00000509743 ODF3BA8MYP8 253 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 SLC25A17O43808 307 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 ACTL6BO94805 426 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 SRP19P09132 144 aaKnown RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 RNASE2P10153 161 aaKnown RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 MYOD1P15172 320 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 GPX4P36969 197 aaPredicted RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 CDC34P49427 236 aaPredicted RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 PDLIM4P50479 330 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 ARF6P62330 175 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 PRSS8Q16651 343 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 HAGHQ16775 308 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 ARSJQ5FYB0 599 aaPredicted RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 SOHLH1Q5JUK2 328 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.34□□□□□ -1.39
SSBP2-213ENST00000509743 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
SSBP2-213ENST00000509743 MGST2Q99735 147 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms