RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 RAB5CP51148 216 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 PAX9P55771 341 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 TAS2R30P59541 319 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 EWSR1Q01844 656 aaKnown RBP eCLIP10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 VMA21Q3ZAQ7 101 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 ZNF429Q86V71 674 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 BPIFCQ8NFQ6 507 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 DTD1Q8TEA8 209 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 TMED6Q8WW62 240 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 C1orf159Q96HA4 380 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 CIB3Q96Q77 187 aaPredicted RBP10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 ARV1Q9H2C2 271 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 FBXL17Q9UF56 701 aa10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 FOXA2Q9Y261 457 aaPredicted RBP10.17□□□□□ -0.78
LYSMD3-204ENST00000509384 TEP1Q99973 2627 aaKnown RBP10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 POLQO75417 2590 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 TRAV20A0A0B4J274 112 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 ZNF705EA8MWA4 302 aaPredicted RBP10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 UPK2O00526 184 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 KBTBD11O94819 623 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 SPCS3P61009 180 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 BAXQ07812 192 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 LOXL1Q08397 574 aaPredicted RBP10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 BTN1A1Q13410 526 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 SSX2Q16385 188 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 SPINK9Q5DT21 86 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 PRSS57Q6UWY2 283 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 LINC01356Q8N9X3 169 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 OR52E5Q8NH55 327 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 OR4A5Q8NH83 315 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 ZDHHC16Q969W1 377 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 TMEM14BQ9NUH8 114 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
LYSMD3-204ENST00000509384 ABCA12Q86UK0 2595 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 VENTXO95231 258 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 IGLV2-23P01705 113 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 GATA3P23771 443 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 CD1BP29016 333 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 F2RL1P55085 397 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 PDLIM3Q53GG5 364 aaPredicted RBP10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 CLEC9AQ6UXN8 241 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 STX12Q86Y82 276 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 NARS2Q96I59 477 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 Q96MF0 132 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 CLCC1Q96S66 551 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 TSNAXQ99598 290 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 SEC11CQ9BY50 192 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 NKX6-2Q9C056 277 aaPredicted RBP10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 TCF19Q9Y242 345 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 OR51B2Q9Y5P1 312 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 CSMD2Q7Z408 3487 aa10.15□□□□□ -0.78
LYSMD3-204ENST00000509384 ARHGAP32A7KAX9 2087 aa10.15□□□□□ -0.79
LYSMD3-204ENST00000509384 NOTCH2Q04721 2471 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 NPFFO15130 113 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 SLC25A17O43808 307 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 SNAPINO95295 136 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 LY86O95711 162 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 SAA4P35542 130 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 HOXA1P49639 335 aaPredicted RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 HSPE1P61604 102 aaKnown RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 NHLH2Q02577 135 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 TMEM267Q0VDI3 215 aaPredicted RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 HABP2Q14520 560 aaPredicted RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 SPANXN5Q5MJ07 72 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 RPL7L1Q6DKI1 246 aaKnown RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 TMEM167AQ8TBQ9 72 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 CFHR4Q92496 578 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 MALSU1Q96EH3 234 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 RNF5Q99942 180 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 C7orf69Q9H7B7 122 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 FKBP11Q9NYL4 201 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 ZNF257Q9Y2Q1 563 aa10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 STRAPQ9Y3F4 350 aaKnown RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 ANKRD17O75179 2603 aaKnown RBP10.14□□□□□ -0.79
LYSMD3-204ENST00000509384 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 CST7O76096 145 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 PAX6P26367 422 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 SULT1A1P50225 295 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 RPL8P62917 257 aaKnown RBP10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 DEFA5Q01523 94 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 PXDC1Q5TGL8 231 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 DYNAPQ8N1N2 210 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 TEX45Q8NA69 505 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 OR5B3Q8NH48 314 aa10.13□□□□□ -0.79
LYSMD3-204ENST00000509384 BSCL2Q96G97 398 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms