RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 ADH4P08319 380 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 PPOXP50336 477 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 EDDM3BP56851 147 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 LTC4SQ16873 150 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 RSPO4Q2I0M5 234 aaPredicted RBP8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 TMEM42Q69YG0 159 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 OOSP2Q86WS3 158 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 SPTSSAQ969W0 71 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 HRASLS2Q9NWW9 162 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 RTTNQ86VV8 2226 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 OR2J3O76001 311 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 AREGP15514 252 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 RPS21P63220 83 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 DOLPP1Q86YN1 238 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 TPRX1Q8N7U7 411 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 OR11H2Q8NH07 326 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 CLDN23Q96B33 292 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 TAAR6Q96RI8 345 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 MTCH1Q9NZJ7 389 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 H3BMH7 237 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 H3BML4 177 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 KLRC4-KLRK1H3BQV0 150 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 FABP2P12104 132 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 GCHFRP30047 84 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 FABP6P51161 128 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 PPP1CAP62136 330 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 RPL8P62917 257 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 CST6Q15828 149 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 MRPL43Q8N983 215 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 MMABQ96EY8 250 aaPredicted RBP8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 NAA38Q9BRA0 125 aaKnown RBP8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 DEC1Q9P2X7 70 aa8.35□□□□□ -1.07
PDGFRA-207ENST00000509092 A0A1W2PP55 124 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 SLC25A17O43808 307 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 MGST1P10620 155 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 OPRK1P41145 380 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 FBXW4P57775 412 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 PRAMEF5Q5TYX0 476 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 PRAMEF6Q5VXH4 476 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 LILRA6Q6PI73 481 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 PQLC2Q6ZP29 291 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 LINC00173Q6ZV60 143 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 SPACA9Q96E40 222 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 C5orf30Q96GV9 206 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF257Q9Y2Q1 563 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 NCKAP5O14513 1909 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 C5orf42Q9H799 3197 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 TNRC6AQ8NDV7 1962 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 A0A1W2PQU0 124 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 HELTA6NFD8 242 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 MPDU1O75352 247 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 CRYGCP07315 174 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 CEBPDP49716 269 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 FOXE3Q13461 319 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 CEACAM21Q3KPI0 293 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 TIGITQ495A1 244 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 RHBDD2Q6NTF9 364 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 FGFRL1Q8N441 504 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 PRO3102Q9H379 93 aa8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 MRPL16Q9NX20 251 aaKnown RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 BOKQ9UMX3 212 aaPredicted RBP8.34□□□□□ -1.07
PDGFRA-207ENST00000509092 IGHV1-24A0A0C4DH33 117 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 SH2D7A6NKC9 451 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 LRRC30A6NM36 301 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 FBLP22087 321 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 RPS16P62249 146 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 ADAMTSL5Q6ZMM2 481 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 MAP1LC3CQ9BXW4 147 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 C21orf140B9A014 251 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 TLX3O43711 291 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 IGFBP2P18065 325 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 SUMO3P55854 103 aaPredicted RBP8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 GDF5OSQ5U4N7 250 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 ZNF611Q8N823 705 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 OXGR1Q96P68 337 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 DUSP23Q9BVJ7 150 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 FGF21Q9NSA1 209 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 WNT16Q9UBV4 365 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 KCNS2Q9ULS6 477 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 BRWD1Q9NSI6 2320 aa8.33□□□□□ -1.08
PDGFRA-207ENST00000509092 TMEM150CB9EJG8 249 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 ZG16O60844 167 aa8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 HNRNPA1P09651 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDGFRA-207ENST00000509092 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms