RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
TRIM41-204ENST00000508930 SPINT2O43291 252 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 ZNF324O75467 553 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-204ENST00000508930 Q56UQ5 140 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 FBXW9Q5XUX1 488 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 RNASE8Q8TDE3 154 aaKnown RBP11.93□□□□□ -0.5
TRIM41-204ENST00000508930 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 WNT9BO14905 357 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 KLF3P57682 345 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-204ENST00000508930 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 MDP1Q86V88 176 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 C5orf30Q96GV9 206 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 A0A1W2PS18 150 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 CELA3AP09093 270 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
TRIM41-204ENST00000508930 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
TRIM41-204ENST00000508930 CCL25O15444 150 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 FOXH1O75593 365 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 APCSP02743 223 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
TRIM41-204ENST00000508930 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 PHF7Q9BWX1 381 aaPredicted RBP11.92□□□□□ -0.5
TRIM41-204ENST00000508930 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
TRIM41-204ENST00000508930 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 P0C879 139 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 PRRX1P54821 245 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 TMEM249Q2WGJ8 235 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 COX19Q49B96 90 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 DCAF12Q5T6F0 453 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 TEPPQ6URK8 271 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 CLCF1Q9UBD9 225 aa11.92□□□□□ -0.5
TRIM41-204ENST00000508930 ZNF83P51522 516 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 EFNB3Q15768 340 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
TRIM41-204ENST00000508930 HLA-DQA1P01909 254 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 ALKBH6Q3KRA9 238 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 ALKBH7Q9BT30 221 aaPredicted RBP11.91□□□□□ -0.5
TRIM41-204ENST00000508930 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 V9GYV3 84 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 IGKV3D-15A0A087WSY6 115 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 CBY3A6NI87 242 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 AMY1AP04745 511 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 GFRA1P56159 465 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 ZNF718Q3SXZ3 478 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
TRIM41-204ENST00000508930 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
TRIM41-204ENST00000508930 TRGV10A0A0A0MS01 117 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 C9JCJ5 164 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 HOXA4Q00056 320 aaPredicted RBP11.9□□□□□ -0.5
TRIM41-204ENST00000508930 ZNF146Q15072 292 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 OR2M7Q8NG81 312 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 VPS25Q9BRG1 176 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 GAL3ST2Q9H3Q3 398 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 M0R2Z0 102 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 NDUFB8O95169 186 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 BRWD1-AS2P59051 145 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 UBE2V1Q13404 147 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 ABHD17BQ5VST6 288 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 MIR17HGQ75NE6 70 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 ERASQ7Z444 233 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 SLC24A4Q8NFF2 622 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 S1PR3Q99500 378 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 SFXN3Q9BWM7 321 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 CA2P00918 260 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 TSPOP30536 169 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 CLDN18P56856 261 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 CX3CL1P78423 397 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
TRIM41-204ENST00000508930 SLC25A40Q8TBP6 338 aa11.9□□□□□ -0.5
TRIM41-204ENST00000508930 NKX6-3A6NJ46 265 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 TMEM11P17152 192 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 NPY1RP25929 384 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 SLC35E4Q6ICL7 350 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 Q8N7P7 452 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 TCF19Q9Y242 345 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 LOXL2Q9Y4K0 774 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 MAGEA5P43359 124 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 CXCL12P48061 93 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 FOXF2Q12947 444 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 PMCHL1Q16048 86 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 TMEM136Q6ZRR5 245 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 NHLRC2Q8NBF2 726 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 OR13A1Q8NGR1 328 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 SSBP3Q9BWW4 388 aaPredicted RBP11.89□□□□□ -0.51
TRIM41-204ENST00000508930 HES7Q9BYE0 225 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 OR10J4P0C629 311 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 COL8A2P25067 703 aa11.89□□□□□ -0.51
TRIM41-204ENST00000508930 ERVK11-1P61568 191 aa11.88□□□□□ -0.51
TRIM41-204ENST00000508930 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
TRIM41-204ENST00000508930 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
TRIM41-204ENST00000508930 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms