RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RTL8AQ9BWD3 113 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 CLEC7AQ9BXN2 247 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 OSTCQ9NRP0 149 aa14.18□□□□□ -0.14
SQSTM1-211ENST00000506690 LY6G6EA0A0G2JKS1 128 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 IGLC7A0M8Q6 106 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 PSPNO60542 156 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 FOXH1O75593 365 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 GNG4P50150 75 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 PLP2Q04941 152 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 ATOH7Q8N100 152 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 U3KQA8 63 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 PTPRBP23467 1997 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 A0A1W2PN81 502 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 OOEPA6NGQ2 149 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 NXPH2O95156 264 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 TNFSF4P23510 183 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 VDAC2P45880 294 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 OR4P4Q8NGL7 312 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 SSMEM1Q8WWF3 244 aa14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 HSD17B10Q99714 261 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 RNASE7Q9H1E1 156 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 MRPL27Q9P0M9 148 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-211ENST00000506690 HELTA6NFD8 242 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 SLC35B1P78383 322 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 LCN12Q6JVE5 192 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 DOLPP1Q86YN1 238 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 TUSC5Q8IXB3 177 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 NINJ1Q92982 152 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 ARL2-SNX15V9GYD0 113 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 FAM90A9PA6NNJ1 464 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 COL8A2P25067 703 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 SELENOVP59797 346 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 MUC15Q8N387 334 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 DEFB123Q8N688 67 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 MRGPRDQ8TDS7 321 aa14.16□□□□□ -0.14
SQSTM1-211ENST00000506690 TRAV9-2A0A087WT02 112 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 SMIM27A0A1W2PRY6 76 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 GFRA3O60609 400 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 HAND1O96004 215 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 MT-CO3P00414 261 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 CGAP01215 116 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 PPBPP02775 128 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 GDF1P27539 372 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 CEBPDP49716 269 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 PQLC2Q6ZP29 291 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 OR4C5Q8NGB2 326 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 NPVFQ9HCQ7 196 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 ISLRO14498 428 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 NTF3P20783 257 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 FXYD3Q14802 87 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 OR1C1Q15619 314 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 SLC35E4Q6ICL7 350 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 STPG3Q8N7X2 389 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 OR52E5Q8NH55 327 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 C18orf32Q8TCD1 76 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 HEYLQ9NQ87 328 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 R4GN57 208 aa14.15□□□□□ -0.14
SQSTM1-211ENST00000506690 UBALD2Q8IYN6 164 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 OR2Y1Q8NGV0 311 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 GP6Q9HCN6 339 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 HCFC1P51610 2035 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 TRAV30A0A087WSZ9 112 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 PINLYPA6NC86 204 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 H0YJW9 148 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 APCSP02743 223 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 TCL1AP56279 114 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 ZNF766Q5HY98 468 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 MRPL54Q6P161 138 aaKnown RBP14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 CACNA1DQ01668 2161 aa14.14□□□□□ -0.15
SQSTM1-211ENST00000506690 CRYBB3P26998 211 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 AESQ08117 197 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 IL11RAQ14626 422 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 TBR1Q16650 682 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 IL19Q9UHD0 177 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 TET2Q6N021 2002 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 IGLL1P15814 213 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 FOXF2Q12947 444 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 GCNT2Q8N0V5 402 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 ABHD12Q8N2K0 398 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 LOXL4Q96JB6 756 aa14.13□□□□□ -0.15
SQSTM1-211ENST00000506690 IGLV2-8P01709 118 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 ARG2P78540 354 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 RHOGP84095 191 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 SLAQ13239 276 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 TIGITQ495A1 244 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 PRAMEF5Q5TYX0 476 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 PRAMEF6Q5VXH4 476 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 TEPPQ6URK8 271 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 OR8B3Q8NGG8 313 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 OR4A16Q8NH70 328 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 COQ2Q96H96 371 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 OR8B2Q96RD0 313 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 COL6A3P12111 3177 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 FAM181BA6NEQ2 426 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 SP1P08047 785 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 LINC00869P0C866 280 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 SRYQ05066 204 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 ETFRF1Q6IPR1 90 aa14.12□□□□□ -0.15
SQSTM1-211ENST00000506690 EBLN2Q6P2I7 272 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms