RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TCTEX1D2Q8WW35 142 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM190Q8WZ59 177 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM203Q969S6 136 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 RAB3CQ96E17 227 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 CXorf58Q96LI9 332 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 GFI1Q99684 422 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 CSTL1Q9H114 145 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 C11orf68Q9H3H3 251 aaKnown RBP5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 APLNQ9ULZ1 77 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 SPATA2Q9UM82 520 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 KCNK7Q9Y2U2 307 aa5.06□□□□□ -1.6
NPIPB3-203ENST00000504841 IGKV1D-8A0A087WSZ0 117 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV3-49A0A0A0MS15 119 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV3-21A0A0B4J1V1 117 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 OR2T8A6NH00 312 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 M0R2N4 97 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 TGOLN2O43493 480 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 DENRO43583 198 aaKnown RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 CRYGCP07315 174 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 ZNF735P0CB33 412 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 GNB3P16520 340 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 HLA-GP17693 338 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 NFYAP23511 347 aaPredicted RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 TALDO1P37837 337 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 RPL8P62917 257 aaKnown RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 HES5Q5TA89 166 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 MS4A15Q8N5U1 240 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 ZNF645Q8N7E2 425 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 GVQW1Q8N7I0 195 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 UBAC2Q8NBM4 344 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 BPIFB6Q8NFQ5 453 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM167AQ8TBQ9 72 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 ZNF502Q8TBZ5 544 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 FAM3DQ96BQ1 224 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 GPHA2Q96T91 129 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 HRASLSQ9HDD0 168 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 DAZ1Q9NQZ3 744 aaKnown RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 TAS2R8Q9NYW2 309 aa5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 RBMX2Q9Y388 322 aaKnown RBP5.05□□□□□ -1.6
NPIPB3-203ENST00000504841 MUC4Q99102 2169 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV4-4A0A075B6R2 117 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM272A0A1B0GTI8 110 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM238LA0A1B0GVL6 79 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 MFNGO00587 321 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 CASQ2O14958 399 aaPredicted RBP5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 TNFSF12O43508 249 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 CDK1P06493 297 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 UCHL1P09936 223 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 HIST1H1DP16402 221 aaKnown RBP5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 GADD45AP24522 165 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 MAS1LP35410 378 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 TMEM187Q14656 261 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 RCN1Q15293 331 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 C2orf76Q3KRA6 126 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 TIMM50Q3ZCQ8 353 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 LIPKQ5VXJ0 399 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 ZNF575Q86XF7 245 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 PUSL1Q8N0Z8 303 aaKnown RBP5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 GBGT1Q8N5D6 347 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 NANOGP1Q8N7R0 232 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 ZNF436Q9C0F3 470 aaPredicted RBP5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 VCXQ9H320 206 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 PSORS1C1Q9UIG5 152 aa5.04□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV3OR16-13A0A075B7E8 117 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV3-74A0A0B4J1X5 117 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 IGKV1D-13A0A0B4J2D9 117 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 IGHV4-28A0A0C4DH34 117 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 IGLC7A0M8Q6 106 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 C11orf94C9JXX5 98 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 DIRAS3O95661 229 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 HSMCR30P0CW71 290 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 IGKV1-13P0DP09 117 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 CALRP27797 417 aaKnown RBP5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 HLA-DMBP28068 263 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 OR2B8PP59922 312 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 RPS25P62851 125 aaKnown RBP5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 SPHARQ15513 63 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 Q56UQ5 140 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 LEMD1Q68G75 181 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 LAIR2Q6ISS4 152 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 Q6ZTC4 211 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 C8orf59Q8N0T1 100 aaPredicted RBP5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 CENPSQ8N2Z9 138 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 DHRSXQ8N5I4 330 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 OR10R2Q8NGX6 335 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 UFD1Q92890 307 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 RNF2Q99496 336 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 HSD17B10Q99714 261 aaKnown RBP5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 CHRDL1Q9BU40 450 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 MND1Q9BWT6 205 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 THYN1Q9P016 225 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 ELF5Q9UKW6 265 aaPredicted RBP5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 RAB22AQ9UL26 194 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 OR2W1Q9Y3N9 320 aa5.03□□□□□ -1.6
NPIPB3-203ENST00000504841 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
NPIPB3-203ENST00000504841 TRAV3A0A0B4J244 114 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms