RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 A0A1W2PS18 150 aa13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 KIAA1644Q3SXP7 199 aa13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 CENPWQ5EE01 88 aa13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 C16orf92Q96LL3 132 aa13.67□□□□□ -0.22
HMGXB3-202ENST00000503427 MPZP25189 248 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 ACSF3Q4G176 576 aaPredicted RBP13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 DNM1P46Q6ZS02 220 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 WFDC3Q8IUB2 231 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 MUC15Q8N387 334 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 TEX29Q8N6K0 151 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 SRSF12Q8WXF0 261 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 SDK2Q58EX2 2172 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 RNF224P0DH78 156 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 APOBEC3AP31941 199 aaPredicted RBP13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 GRIFINA4D1Z8 144 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 M0R3E3 92 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 WNT9BO14905 357 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 TUBA4BQ9H853 241 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 SIAH2O43255 324 aa13.66□□□□□ -0.22
HMGXB3-202ENST00000503427 LOC105371267A0A1B0GV96 52 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 CCL1P22362 96 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 TMEM238LA0A1B0GVL6 79 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 A6NJY4 79 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 PRR32B1ATL7 298 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 EGR1P18146 543 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 GAGE10A6NGK3 116 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 RRHO14718 337 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 REC114Q7Z4M0 266 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 ZNRF1Q8ND25 227 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 OR10AG1Q8NH19 301 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 RPL39P5Q59GN2 51 aa13.65□□□□□ -0.22
HMGXB3-202ENST00000503427 FAM27E3Q08E93 113 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 CLDND2Q8NHS1 167 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 OSR1Q8TAX0 266 aaPredicted RBP13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 CLEC7AQ9BXN2 247 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 MGAMO43451 1857 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 F8VVB4 439 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 F8VWA3 439 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 GFRA1P56159 465 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 CACNA1BQ00975 2339 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 PIMREGQ9BSJ6 248 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 PROB1E7EW31 1015 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 RAB9AP51151 201 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 FAM89BQ8N5H3 189 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 ZNF502Q8TBZ5 544 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 C18orf12Q96KH6 178 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 CBLN4Q9NTU7 201 aa13.64□□□□□ -0.23
HMGXB3-202ENST00000503427 IGHV1-2P23083 117 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 CBLN1P23435 193 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 TCF24Q7RTU0 167 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 SEMA5BQ9P283 1151 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 TRBV23-1A0A0A0MS06 115 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 C17orf98A8MV24 154 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 ZNF837Q96EG3 531 aaPredicted RBP13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 RTN4RQ9BZR6 473 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 IGHV2OR16-5A0A0B4J2B6 119 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 REG1AP05451 166 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 LIPFP07098 398 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 SOD3P08294 240 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 FABP2P12104 132 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 GFI1Q99684 422 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 TMEM70Q9BUB7 260 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 TCTAP57738 103 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 ZNF525Q8N782 197 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 WFIKKN1Q96NZ8 548 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 DEPPQ9NTK1 212 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 IL36BQ9NZH7 164 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 SS18L1O75177 396 aaPredicted RBP13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 ANOS1P23352 680 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 EBLN2Q6P2I7 272 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 IFI27L2Q9H2X8 130 aa13.63□□□□□ -0.23
HMGXB3-202ENST00000503427 A0A087WV48 116 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 LOC102724200A0A096LPH7 203 aaPredicted RBP13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 HBBP68871 147 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 TRBV6-7A0A0A0MS04 114 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 IGKV1-9A0A0C4DH69 117 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 TM4SF5O14894 197 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 EAF1Q96JC9 268 aaPredicted RBP13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 NEU1Q99519 415 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 RALGAPA1Q6GYQ0 2036 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 FGF16O43320 207 aa13.62□□□□□ -0.23
HMGXB3-202ENST00000503427 UQCRFS1P47985 274 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms