RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
CTDSP1-214ENST00000497677 A0A1W2PRX2 142 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 AP4M1O00189 453 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 CCSO14618 274 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 TNFSF12O43508 249 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 ADAP1O75689 374 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 SLC25A4P12235 298 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 PSMB6P28072 239 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 FOXRED2Q8IWF2 684 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 OR4F17Q8NGA8 305 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 THAP6Q8TBB0 222 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 LSM10Q969L4 123 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 OR4F4Q96R69 305 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
CTDSP1-214ENST00000497677 SMLR1H3BR10 107 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 NBR2O15453 112 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.45e-6■■■□□ 19.2
CTDSP1-214ENST00000497677 KCNAB3O43448 404 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 NDUFA3O95167 84 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 MC5RP33032 325 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 CFHR3Q02985 330 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 C5orf64Q2M2E5 130 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 C11orf87Q6NUJ2 197 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 FAM219AQ8IW50 185 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 SLC35G3Q8N808 338 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 SEC22AQ96IW7 307 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 ZNF580Q9UK33 172 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
CTDSP1-214ENST00000497677 G3V3Q6 166 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 RLN2P04090 185 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 IGF1P05019 195 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 THBS3P49746 956 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 NKX2-5P52952 324 aaPredicted RBP12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 SMCO1Q147U7 214 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 LYZL2Q7Z4W2 148 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 WFDC9Q8NEX5 89 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 TCTEX1D2Q8WW35 142 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 PRR13Q9NZ81 148 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 WASHC3Q9Y3C0 194 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
CTDSP1-214ENST00000497677 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 A0A1B0GU03 582 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 MPC2O95563 127 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 DEFA6Q01524 100 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 IL15RAQ13261 267 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 OR10C1Q96KK4 312 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 RNF5Q99942 180 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.41
CTDSP1-214ENST00000497677 M0R1X1 148 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 FCN1O00602 326 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 RRHO14718 337 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 WIPF1O43516 503 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 SLC35B1P78383 322 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 ZNF546Q86UE3 836 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 SPAG16Q8N0X2 631 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 OR11H4Q8NGC9 324 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 FBXL15Q9H469 300 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 GSKIPQ9P0R6 139 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 HSPB11Q9Y547 144 aa12.51□□□□□ -0.41
CTDSP1-214ENST00000497677 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 A0A0D9SG52 128 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 G3V4G9 280 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 H7C2Y5 167 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 IGHG4P01861 327 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 LYL1P12980 280 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 PPIFP30405 207 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 NDPQ00604 133 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 OR2F1Q13607 317 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 ZNF345Q14585 488 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 Q5BKY6 102 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 SAMD5Q5TGI4 173 aa12.5□□□□□ -0.41
CTDSP1-214ENST00000497677 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms