RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 CLEC19AQ6UXS0 136 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 C19orf35Q6ZS72 473 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 GPHB5Q86YW7 130 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 DMBX1Q8NFW5 382 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 OR5H2Q8NGV7 314 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 OR6F1Q8NGZ6 308 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 OR51H1Q8NH63 302 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 SLC25A46Q96AG3 418 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 EEF1AKMT3Q96AZ1 226 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 SRSF8Q9BRL6 282 aaKnown RBP9.67□□□□□ -0.86
PTPRF-214ENST00000496043 TM2D3Q9BRN9 247 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 ZNF2Q9BSG1 426 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-214ENST00000496043 COMMD5Q9GZQ3 224 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 ANAPC10Q9UM13 185 aa9.67□□□□□ -0.86
PTPRF-214ENST00000496043 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 CGB1A6NKQ9 187 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 LGALS9O00182 355 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 PGLYRP1O75594 196 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-214ENST00000496043 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 HLA-AP01891 365 aaKnown RBP9.66□□□□□ -0.86
PTPRF-214ENST00000496043 REG1AP05451 166 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 ARL3P36405 182 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 OR2B8PP59922 312 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 DEFB114Q30KQ6 69 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 CD300EQ496F6 205 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-214ENST00000496043 ADAMTSL5Q6ZMM2 481 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 LYSMD2Q8IV50 215 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 CMTM1Q8IZ96 169 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 MOB3AQ96BX8 217 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 CXorf58Q96LI9 332 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 CMTM3Q96MX0 182 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 THAP7Q9BT49 309 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-214ENST00000496043 TECRQ9NZ01 308 aaKnown RBP9.66□□□□□ -0.86
PTPRF-214ENST00000496043 COMMD9Q9P000 198 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 THYN1Q9P016 225 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 COMMD3Q9UBI1 195 aa9.66□□□□□ -0.86
PTPRF-214ENST00000496043 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 S1PR2O95136 353 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 CLEC3BP05452 202 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 FGF2P09038 288 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 TRAPPC2P0DI81 140 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 TRAPPC2BP0DI82 140 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 FOLR2P14207 255 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 F2RP25116 425 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 LPAR6P43657 344 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 ERVK-16P61578 105 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 LPCAT3Q6P1A2 487 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 LAX1Q8IWV1 398 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 TMEM140Q9NV12 185 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 SLC2A8Q9NY64 477 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 S4R3C0 116 aa9.65□□□□□ -0.86
PTPRF-214ENST00000496043 HUWE1Q7Z6Z7 4374 aaKnown RBP9.64□□□□□ -0.87
PTPRF-214ENST00000496043 IGLV11-55A0A075B6I3 123 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 TEX50A0A1B0GTY4 177 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 ZNF320A2RRD8 509 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 GPR31O00270 319 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 CYB5BO43169 146 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 APOA1P02647 267 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 RPA2P15927 270 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 CBLN1P23435 193 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 HLA-DMAP28067 261 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 VBP1P61758 197 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 TSPAN5P62079 268 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 HAGHQ16775 308 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
PTPRF-214ENST00000496043 HSD17B13Q7Z5P4 300 aaPredicted RBP9.64□□□□□ -0.87
PTPRF-214ENST00000496043 CADM3Q8N126 398 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 OR1L8Q8NGR8 309 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 GPX8Q8TED1 209 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
PTPRF-214ENST00000496043 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 CITED4Q96RK1 184 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 NEURL2Q9BR09 285 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
PTPRF-214ENST00000496043 QTRT1Q9BXR0 403 aaKnown RBP9.64□□□□□ -0.87
PTPRF-214ENST00000496043 IGLC7A0M8Q6 106 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 SNAPC5O75971 98 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 TPPPO94811 219 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 KRASP01116 189 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 RLN1P04808 185 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 IFNA6P05013 189 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 EIF4EP06730 217 aaKnown RBP9.63□□□□□ -0.87
PTPRF-214ENST00000496043 LYL1P12980 280 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 PTBP1P26599 531 aaKnown RBP eCLIP9.63□□□□□ -0.875e-8■■■■□ 21.9
PTPRF-214ENST00000496043 S100GP29377 79 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 HRH1P35367 487 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 RORCP51449 518 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 CD81P60033 236 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 NCS1P62166 190 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 GUCA2BQ16661 112 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 SLC25A24Q6NUK1 477 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 SCPEP1Q9HB40 452 aa9.63□□□□□ -0.87
PTPRF-214ENST00000496043 KMT2CQ8NEZ4 4911 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms