RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 TNXAQ16473 311 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 FOXRED2Q8IWF2 684 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 ZNF702PQ9H963 129 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.4■□□□□ 0.06
ATG3-208ENST00000495756 COA4Q9NYJ1 87 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 FOXA2Q9Y261 457 aaPredicted RBP15.4■□□□□ 0.06
ATG3-208ENST00000495756 LINC01548A6NM66 108 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 SLC25A6P12236 298 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 NDPQ00604 133 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 SMCO1Q147U7 214 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 FXYD3Q14802 87 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 C10orf55Q5SWW7 151 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 THOC7Q6I9Y2 204 aaKnown RBP15.4■□□□□ 0.06
ATG3-208ENST00000495756 ZNF429Q86V71 674 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 Q8N2B8 174 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 TAF15Q92804 592 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATG3-208ENST00000495756 QTRT1Q9BXR0 403 aaKnown RBP15.4■□□□□ 0.06
ATG3-208ENST00000495756 COMMD5Q9GZQ3 224 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 FKBP11Q9NYL4 201 aa15.4■□□□□ 0.06
ATG3-208ENST00000495756 KCNAB3O43448 404 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 TSPAN9O75954 239 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 AARDQ4LEZ3 155 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 Q6ZSV7 163 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 SLC35E3Q7Z769 313 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 ARPC1AQ92747 370 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 OR10C1Q96KK4 312 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 SPIN2AQ99865 258 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 SPIN2BQ9BPZ2 258 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 OR51B2Q9Y5P1 312 aa15.39■□□□□ 0.05
ATG3-208ENST00000495756 TEX50A0A1B0GTY4 177 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 C13orf42A0A1B0GVH6 325 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 FAM25EA8MYX2 175 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 GOSR2O14653 212 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 ST8SIA3O43173 380 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 PITX3O75364 302 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 OPN1MWP04001 364 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 OPN1MW2P0DN77 364 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 OPN1MW3P0DN78 364 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 PRIMA1Q86XR5 153 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 OR5M8Q8NGP6 311 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 OR5B3Q8NH48 314 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 GRPEL2Q8TAA5 225 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 SRSF12Q8WXF0 261 aaKnown RBP15.38■□□□□ 0.05
ATG3-208ENST00000495756 MED28Q9H204 178 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 PARP11Q9NR21 331 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 ZNF257Q9Y2Q1 563 aa15.38■□□□□ 0.05
ATG3-208ENST00000495756 TET2Q6N021 2002 aaPredicted RBP15.37■□□□□ 0.05
ATG3-208ENST00000495756 C5orf51A6NDU8 294 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 E7EUB6 86 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 RPL27AP46776 148 aaKnown RBP15.37■□□□□ 0.05
ATG3-208ENST00000495756 IAH1Q2TAA2 248 aaPredicted RBP15.37■□□□□ 0.05
ATG3-208ENST00000495756 GSG1LQ6UXU4 331 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 OR1L8Q8NGR8 309 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 OR1S1Q8NH92 325 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 ABHD5Q8WTS1 349 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 MGAT4CQ9UBM8 478 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 FBXO7Q9Y3I1 522 aa15.37■□□□□ 0.05
ATG3-208ENST00000495756 A0A1B0GW64 132 aa15.36■□□□□ 0.05
ATG3-208ENST00000495756 ATP6V0E1O15342 81 aa15.36■□□□□ 0.05
ATG3-208ENST00000495756 NDUFA7O95182 113 aa15.36■□□□□ 0.05
ATG3-208ENST00000495756 EGR2P11161 476 aaPredicted RBP15.36■□□□□ 0.05
ATG3-208ENST00000495756 HSPE1P61604 102 aaKnown RBP15.36■□□□□ 0.05
ATG3-208ENST00000495756 RRAS2P62070 204 aaPredicted RBP15.36■□□□□ 0.05
ATG3-208ENST00000495756 TMEM95Q3KNT9 176 aa15.36■□□□□ 0.05
ATG3-208ENST00000495756 ARSJQ5FYB0 599 aaPredicted RBP15.36■□□□□ 0.05
ATG3-208ENST00000495756 FAM103A1Q9BTL3 118 aaKnown RBP15.36■□□□□ 0.05
ATG3-208ENST00000495756 MSGN1A6NI15 193 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 CGB1A6NKQ9 187 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 SIX6O95475 246 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 IFNA17P01571 189 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 IGF1P05019 195 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 FCN2Q15485 313 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 ZBTB8BQ8NAP8 495 aaPredicted RBP15.35■□□□□ 0.05
ATG3-208ENST00000495756 OR2T6Q8NHC8 308 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 SGMS2Q8NHU3 365 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 FYTTD1Q96QD9 318 aaKnown RBP15.35■□□□□ 0.05
ATG3-208ENST00000495756 PDCD10Q9BUL8 212 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 NDUFA4L2Q9NRX3 87 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 CACFD1Q9UGQ2 172 aa15.35■□□□□ 0.05
ATG3-208ENST00000495756 AP4M1O00189 453 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 TRAPPC2P0DI81 140 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 TRAPPC2BP0DI82 140 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 CXCL3P19876 107 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 H2BFSP57053 126 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 CXorf66Q5JRM2 361 aaPredicted RBP15.34■□□□□ 0.05
ATG3-208ENST00000495756 OR11H7Q8NGC8 314 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 OR52E5Q8NH55 327 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 C2orf50Q96LR7 162 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 HINT2Q9BX68 163 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 C16orf95Q9H693 158 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 GSKIPQ9P0R6 139 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 HSPB7Q9UBY9 170 aa15.34■□□□□ 0.05
ATG3-208ENST00000495756 TEX22C9J3V5 150 aa15.33■□□□□ 0.05
ATG3-208ENST00000495756 NXPH3O95157 252 aa15.33■□□□□ 0.05
ATG3-208ENST00000495756 VDAC2P45880 294 aaPredicted RBP15.33■□□□□ 0.05
ATG3-208ENST00000495756 SPCS3P61009 180 aa15.33■□□□□ 0.05
ATG3-208ENST00000495756 PRCDQ00LT1 54 aa15.33■□□□□ 0.05
ATG3-208ENST00000495756 TNFRSF9Q07011 255 aa15.33■□□□□ 0.05
ATG3-208ENST00000495756 PDLIM3Q53GG5 364 aaPredicted RBP15.33■□□□□ 0.05
ATG3-208ENST00000495756 OR4D5Q8NGN0 318 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms