RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 BEX4Q9NWD9 120 aaPredicted RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 TBL2Q9Y4P3 447 aaKnown RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 IGHV4-30-2A0A087WSY4 118 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 A0A1B0GW64 132 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 MFSD2BA6NFX1 497 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 NUDT19A8MXV4 375 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 UMAD1C9J7I0 102 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 TRIM77I1YAP6 450 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 SHOXO15266 292 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 CST7O76096 145 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 NDUFA3O95167 84 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 IAPPP10997 89 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 SLC25A16P16260 332 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 S100A1P23297 94 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 CEACAM3P40198 252 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 DVL1P1P54792 670 aaPredicted RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 DLX1P56177 255 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 RAB14P61106 215 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 RPL8P62917 257 aaKnown RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 RPP30P78346 268 aaKnown RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 SSBP2P81877 361 aaPredicted RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 PSG5Q15238 335 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 KLK9Q2XQG4 91 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 C2orf83Q53S99 150 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 CLEC2AQ6UVW9 174 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 PRSS57Q6UWY2 283 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 BTNL8Q6UX41 500 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 HSD17B13Q7Z5P4 300 aaPredicted RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 PDZD9Q8IXQ8 264 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 OR1S2Q8NGQ3 325 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 TMED6Q8WW62 240 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 PINX1Q96BK5 328 aaKnown RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 MALSU1Q96EH3 234 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 GNPNAT1Q96EK6 184 aaPredicted RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 HARBI1Q96MB7 349 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 PSMG3Q9BT73 122 aaPredicted RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 WDR61Q9GZS3 305 aaKnown RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 PARP11Q9NR21 331 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 ONECUT1Q9UBC0 465 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 KLK9Q9UKQ9 250 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 SIGLEC9Q9Y336 463 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 STRAPQ9Y3F4 350 aaKnown RBP5.45□□□□□ -1.54
MSH5-217ENST00000494458 TIMM9Q9Y5J7 89 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 TACC2O95359 2948 aa5.45□□□□□ -1.54
MSH5-217ENST00000494458 ASH1LQ9NR48 2969 aaKnown RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 RAB19A4D1S5 217 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 E7EUB6 86 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 TOX4O94842 621 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 NXPH3O95157 252 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 VENTXO95231 258 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 METTL15P1P0C7V9 234 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 ATP6V0CP27449 155 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 REG1BP48304 166 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 OR2B8PP59922 312 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 KRTAP10-9P60411 292 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 RPS16P62249 146 aaKnown RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 HBG1P69891 147 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 HBG2P69892 147 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 LCN2P80188 198 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 DLK1P80370 383 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SERF2P84101 59 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 AKAP6Q13023 2319 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 PMS2P11Q13670 270 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 PRSS8Q16651 343 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SPANXN5Q5MJ07 72 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 FAM74A1Q5RGS3 127 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 CCDC144NLQ6NUI1 221 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 DPPA3Q6W0C5 159 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SSX9Q7RTT3 188 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 DYNAPQ8N1N2 210 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 ZNF114Q8NC26 417 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 OR1L8Q8NGR8 309 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 OR2G3Q8NGZ4 309 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 RPEQ96AT9 228 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SRSF8Q9BRL6 282 aaKnown RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 SCRT1Q9BWW7 348 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SMIM3Q9BZL3 60 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 MEGF9Q9H1U4 602 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 ZNF430Q9H8G1 570 aaPredicted RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 LPAR2Q9HBW0 351 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SIRT7Q9NRC8 400 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 LSM4Q9Y4Z0 139 aaKnown RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 OR51B2Q9Y5P1 312 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 TNCP24821 2201 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 ARHGAP32A7KAX9 2087 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 SPG11Q96JI7 2443 aa5.44□□□□□ -1.54
MSH5-217ENST00000494458 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
MSH5-217ENST00000494458 TRAV1-1A0A0B4J248 108 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 CENPVL3A0A0U1RRI6 287 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 CEBPZOSA8MTT3 80 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 H3BP45 60 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 H7C2Y5 167 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 RRHO14718 337 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 TIMM23O14925 209 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 SOX15O60248 233 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 IFNA17P01571 189 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 RNASE2P10153 161 aaKnown RBP5.43□□□□□ -1.54
MSH5-217ENST00000494458 GATA3P23771 443 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 COX7A1P24310 79 aa5.43□□□□□ -1.54
MSH5-217ENST00000494458 BLOC1S1P78537 153 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms