RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SRSF12Q8WXF0 261 aaKnown RBP6.01□□□□□ -1.45
VEGFA-214ENST00000493786 TAF15Q92804 592 aaKnown RBP eCLIP6.01□□□□□ -1.45
VEGFA-214ENST00000493786 TMEM68Q96MH6 324 aa6.01□□□□□ -1.45
VEGFA-214ENST00000493786 FYTTD1Q96QD9 318 aaKnown RBP6.01□□□□□ -1.45
VEGFA-214ENST00000493786 PRR13Q9NZ81 148 aa6.01□□□□□ -1.45
VEGFA-214ENST00000493786 CACFD1Q9UGQ2 172 aa6.01□□□□□ -1.45
VEGFA-214ENST00000493786 SHPKQ9UHJ6 478 aa6.01□□□□□ -1.45
VEGFA-214ENST00000493786 OR51B2Q9Y5P1 312 aa6.01□□□□□ -1.45
VEGFA-214ENST00000493786 CUBNO60494 3623 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 C15orf61A6NNL5 157 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 IFNA17P01571 189 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 IGKV1-5P01602 117 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OPN1MWP04001 364 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 IL5P05113 134 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OR9G9P0C7N8 305 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 SULT1A3P0DMM9 295 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 SULT1A4P0DMN0 295 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OPN1MW2P0DN77 364 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OPN1MW3P0DN78 364 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 MECP2P51608 486 aaKnown RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 OR2B8PP59922 312 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 ANKRD55Q3KP44 614 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 AWAT1Q58HT5 328 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 TMEM65Q6PI78 240 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 Q6ZS46 218 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 LYZL2Q7Z4W2 148 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 COMMD1Q8N668 190 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 LRTM2Q8N967 370 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 MINDY2Q8NBR6 621 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OR4X2Q8NGF9 303 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OR1L8Q8NGR8 309 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 OR1S1Q8NH92 325 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 SGMS2Q8NHU3 365 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 LHFPL5Q8TAF8 219 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 MITD1Q8WV92 249 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 LSM10Q969L4 123 aaKnown RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 NOL4LQ96MY1 436 aaPredicted RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 SEC22CQ9BRL7 303 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 MARVELD1Q9BSK0 173 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 FAM103A1Q9BTL3 118 aaKnown RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 HINT2Q9BX68 163 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 QTRT1Q9BXR0 403 aaKnown RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 ENY2Q9NPA8 101 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 CTNNBIP1Q9NSA3 81 aaPredicted RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 SERTAD4Q9NUC0 356 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 CACNG5Q9UF02 275 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 LINC00527Q9UJ94 153 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 ZNF580Q9UK33 172 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 FOXA2Q9Y261 457 aaPredicted RBP6□□□□□ -1.45
VEGFA-214ENST00000493786 NSG2Q9Y328 171 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 TMED3Q9Y3Q3 217 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 WSB1Q9Y6I7 421 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 ATRQ13535 2644 aa6□□□□□ -1.45
VEGFA-214ENST00000493786 TRAV3A0A0B4J244 114 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 A0A1B0GU03 582 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 A0A1W2PN81 502 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 MSGN1A6NI15 193 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 LINC01548A6NM66 108 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 CYB5BO43169 146 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 FBXO24O75426 580 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 HOXB5P09067 269 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 TRAPPC2P0DI81 140 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 TRAPPC2BP0DI82 140 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 CHRNA7P36544 502 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 HOXA1P49639 335 aaPredicted RBP5.99□□□□□ -1.45
VEGFA-214ENST00000493786 CRIP2P52943 208 aaPredicted RBP5.99□□□□□ -1.45
VEGFA-214ENST00000493786 NDPQ00604 133 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 SMCO1Q147U7 214 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 AKIRIN2Q53H80 203 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 KHDC1LQ5JSQ8 128 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 C10orf55Q5SWW7 151 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 TEX38Q6PEX7 206 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 HSD17B13Q7Z5P4 300 aaPredicted RBP5.99□□□□□ -1.45
VEGFA-214ENST00000493786 C12orf45Q8N5I9 185 aaPredicted RBP5.99□□□□□ -1.45
VEGFA-214ENST00000493786 C3orf56Q8N813 242 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 LFNGQ8NES3 379 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 OR5AU1Q8NGC0 362 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 OR52B4Q8NGK2 314 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 OR5M8Q8NGP6 311 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 GPR146Q96CH1 333 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 SRSF8Q9BRL6 282 aaKnown RBP5.99□□□□□ -1.45
VEGFA-214ENST00000493786 PLEKHA3Q9HB20 300 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 ZNF355PQ9NSJ1 428 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 TMEM14BQ9NUH8 114 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 COA4Q9NYJ1 87 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 ZNF257Q9Y2Q1 563 aa5.99□□□□□ -1.45
VEGFA-214ENST00000493786 TEX50A0A1B0GTY4 177 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 CEBPZOSA8MTT3 80 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 SNRPGP15A8MWD9 76 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 FAM25EA8MYX2 175 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 G3V318 75 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 SSNA1O43805 119 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 IL6RP08887 468 aaPredicted RBP5.98□□□□□ -1.45
VEGFA-214ENST00000493786 P0C879 139 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 APELAP0DMC3 54 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 SLC25A6P12236 298 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 DEFA4P12838 97 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 SPNP16150 400 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 PROK1P58294 105 aa5.98□□□□□ -1.45
VEGFA-214ENST00000493786 SPCS3P61009 180 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms